LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-767-5p


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Gene
miRNA
Score
DIANA Links
AC004988.1
hsa-miR-767-5p
0.722
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000415237
Biotype: antisense
Gene id: ENSG00000203446
Gene Name: AC004988.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
464-483
0.026
3
RP11-362K2.2
hsa-miR-767-5p
0.722
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000552519
Biotype: lincRNA
Gene id: ENSG00000258231
Gene Name: RP11-362K2.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
20-42
0.016
0
7mer
468-492
0.011
0
CTC-360P9.4
hsa-miR-767-5p
0.722
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000590053
Biotype: lincRNA
Gene id: ENSG00000267489
Gene Name: CTC-360P9.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
313-333
0.026
0
SNHG14
hsa-miR-767-5p
0.721
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000424208
Biotype: antisense
Gene id: ENSG00000224078
Gene Name: SNHG14
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
198-222
0.006
1
6mer
2947-2965
0.004
1
7mer
2620-2644
0.004
0
7mer
1203-1220
0.003
1
7mer
688-711
0.003
0
7mer
2449-2466
0.003
0
6mer
1946-1964
0.002
1
6mer
222-247
0.001
Not Conserved
6mer
718-736
0.001
Not Conserved
XLOC_007201
hsa-miR-767-5p
0.720
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00015156
Biotype: transcript isomorph
Gene id: XLOC_007201
Gene Name: XLOC_007201
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
19-39
0.023
Not Conserved
6mer
55-76
0.004
1
CTD-2024I7.13
hsa-miR-767-5p
0.720
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000502205
Biotype: antisense
Gene id: ENSG00000246422
Gene Name: CTD-2024I7.13
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2073-2091
0.015
2
7mer
1839-1865
0.011
1
H19
hsa-miR-767-5p
0.720
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000411861
Biotype: retained_intron
Gene id: ENSG00000130600
Gene Name: H19
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
816-831
0.021
5
8mer
1201-1220
0.003
Not Conserved
6mer
1371-1393
0.002
0
LINC01265
hsa-miR-767-5p
0.719
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000506463
Biotype: lincRNA
Gene id: ENSG00000249911
Gene Name: LINC01265
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Colon Normal/Primary
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
574-599
0.018
2
6mer
265-286
0.005
5
6mer
62-78
0.004
0
LINC00466
hsa-miR-767-5p
0.719
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000436475
Biotype: lincRNA
Gene id: ENSG00000224209
Gene Name: LINC00466
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
848-874
0.021
1
7mer
647-665
0.006
3
LINC00992
hsa-miR-767-5p
0.719
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000504107
Biotype: lincRNA
Gene id: ENSG00000248663
Gene Name: LINC00992
UCSC graphic:
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
157-172
0.026
1
DNAH17-AS1
hsa-miR-767-5p
0.719
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000598378
Biotype: retained_intron
Gene id: ENSG00000267432
Gene Name: DNAH17-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3314-3335
0.018
8
8mer
1868-1891
0.004
6
6mer
3947-3965
0.002
Not Conserved
6mer
760-778
0.001
0
6mer
2504-2527
0.001
0
RP11-269C23.5
hsa-miR-767-5p
0.718
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000613838
Biotype: lincRNA
Gene id: ENSG00000277831
Gene Name: RP11-269C23.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
140-163
0.026
1
RP11-53O19.3
hsa-miR-767-5p
0.718
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000607056
Biotype: lincRNA
Gene id: ENSG00000272335
Gene Name: RP11-53O19.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1771-1793
0.015
1
7mer
1810-1829
0.011
1
RP11-148B6.1
hsa-miR-767-5p
0.718
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000510655
Biotype: antisense
Gene id: ENSG00000249532
Gene Name: RP11-148B6.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
604-631
0.019
Not Conserved
6mer
127-141
0.007
5
LINC00511
hsa-miR-767-5p
0.718
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000580500
Biotype: lincRNA
Gene id: ENSG00000227036
Gene Name: LINC00511
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
144-157
0.015
1
7mer
376-402
0.011
2
CTA-414D7.1
hsa-miR-767-5p
0.718
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623440
Biotype: sense_intronic
Gene id: ENSG00000279175
Gene Name: CTA-414D7.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5136-5158
0.005
0
8mer
3508-3527
0.005
1
7mer
9802-9824
0.005
0
7mer
7858-7884
0.005
1
6mer
145-161
0.003
1
7mer
4655-4670
0.002
0
LINC01189
hsa-miR-767-5p
0.718
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000428440
Biotype: lincRNA
Gene id: ENSG00000232827
Gene Name: LINC01189
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1120-1141
0.026
1
XLOC_012222
hsa-miR-767-5p
0.717
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025121
Biotype: transcript isomorph
Gene id: XLOC_012222
Gene Name: XLOC_012222
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
468-484
0.013
5
7mer
42-56
0.013
3
RP11-6N17.1
hsa-miR-767-5p
0.717
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000581213
Biotype: lincRNA
Gene id: ENSG00000264243
Gene Name: RP11-6N17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
468-484
0.013
5
7mer
42-56
0.013
3
MIR7515HG
hsa-miR-767-5p
0.717
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000586753
Biotype: lincRNA
Gene id: ENSG00000236172
Gene Name: MIR7515HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
90-107
0.026
7
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