LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-767-5p


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Gene
miRNA
Score
DIANA Links
XLOC_002813
hsa-miR-767-5p
0.989
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006222
Biotype: transcript isomorph
Gene id: XLOC_002813
Gene Name: XLOC_002813
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
253-267
0.064
0
7mer
935-955
0.017
0
6mer
469-488
0.004
0
LINC01031
hsa-miR-767-5p
0.989
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000420807
Biotype: lincRNA
Gene id: ENSG00000232077
Gene Name: LINC01031
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
728-749
0.078
1
6mer
715-730
0.006
2
XLOC_006353
hsa-miR-767-5p
0.989
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013695
Biotype: transcript isomorph
Gene id: XLOC_006353
Gene Name: XLOC_006353
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
424-449
0.084
3
RP11-481J2.4
hsa-miR-767-5p
0.988
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000622896
Biotype: antisense
Gene id: ENSG00000276259
Gene Name: RP11-481J2.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
439-461
0.083
10
RP11-34P13.13
hsa-miR-767-5p
0.988
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000484859
Biotype: antisense
Gene id: ENSG00000241860
Gene Name: RP11-34P13.13
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4786-4806
0.047
1
8mer
433-457
0.031
0
6mer
2228-2246
0.005
1
XLOC_000508
hsa-miR-767-5p
0.987
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001231
Biotype: transcript isomorph
Gene id: XLOC_000508
Gene Name: XLOC_000508
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1464-1485
0.076
1
6mer
1451-1466
0.005
2
CTB-131B5.5
hsa-miR-767-5p
0.986
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000607850
Biotype: retained_intron
Gene id: ENSG00000254363
Gene Name: CTB-131B5.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
4931-4955
0.043
5
8mer
5339-5357
0.034
2
6mer
2497-2514
0.001
0
6mer
4476-4489
0.001
1
6mer
1065-1087
0.001
0
XLOC_010750
hsa-miR-767-5p
0.986
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022417
Biotype: transcript isomorph
Gene id: XLOC_010750
Gene Name: XLOC_010750
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
437-460
0.080
1
AC006548.28
hsa-miR-767-5p
0.985
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623130
Biotype: sense_overlapping
Gene id: ENSG00000280156
Gene Name: AC006548.28
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3273-3292
0.008
2
7mer
44140-44160
0.005
2
7mer
3672-3690
0.005
1
9mer
17282-17305
0.005
0
8mer
73978-74002
0.004
1
6mer
8801-8823
0.003
7
7mer
2021-2040
0.003
1
7mer
47798-47821
0.003
Not Conserved
7mer
32825-32840
0.003
0
7mer
81517-81541
0.002
0
7mer
52441-52464
0.002
Not Conserved
6mer
71141-71165
0.002
0
9mer
17200-17224
0.002
0
6mer
71351-71374
0.002
0
7mer
76678-76701
0.002
Not Conserved
6mer
60614-60640
0.002
0
6mer
45673-45696
0.001
Not Conserved
6mer
29697-29715
0.001
1
6mer
36243-36258
0.001
1
7mer
8097-8113
0.001
1
7mer
11688-11715
0.001
0
6mer
56466-56489
0.001
0
6mer
27648-27674
0.001
1
6mer
13112-13124
0.001
2
6mer
75121-75140
0.001
0
6mer
8143-8168
0.001
1
6mer
13499-13512
0.001
1
6mer
10826-10847
0.001
1
6mer
39601-39616
0.001
3
6mer
63088-63105
0.001
1
6mer
53303-53329
0.001
Not Conserved
9mer
17118-17142
0.001
1
6mer
17959-17983
0.001
1
6mer
38603-38620
0.001
1
6mer
38171-38194
0.001
Not Conserved
6mer
37154-37175
0.001
0
6mer
40618-40642
0.001
1
6mer
62069-62093
0.001
0
6mer
7864-7887
0.001
1
6mer
14416-14437
0.001
0
CTD-2128A3.2
hsa-miR-767-5p
0.985
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000557547
Biotype: lincRNA
Gene id: ENSG00000258902
Gene Name: CTD-2128A3.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
468-489
0.079
5
RP4-715N11.2
hsa-miR-767-5p
0.984
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000421642
Biotype: lincRNA
Gene id: ENSG00000232294
Gene Name: RP4-715N11.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
255-273
0.070
4
7mer
301-325
0.008
0
RP11-255A11.2
hsa-miR-767-5p
0.983
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000420315
Biotype: antisense
Gene id: ENSG00000228072
Gene Name: RP11-255A11.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
215-239
0.077
0
RP11-145M9.5
hsa-miR-767-5p
0.983
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000608131
Biotype: antisense
Gene id: ENSG00000272699
Gene Name: RP11-145M9.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
419-442
0.077
1
RP4-715N11.2
hsa-miR-767-5p
0.982
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000425279
Biotype: lincRNA
Gene id: ENSG00000232294
Gene Name: RP4-715N11.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
114-136
0.066
4
7mer
164-188
0.009
0
LOC100506730
hsa-miR-767-5p
0.982
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_037847.1
Biotype: lincRNA
Gene id: NR_037847.1 (gene)
Gene Name: LOC100506730
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
94-111
0.057
0
7mer
952-976
0.019
1
RP4-715N11.2
hsa-miR-767-5p
0.981
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000448013
Biotype: lincRNA
Gene id: ENSG00000232294
Gene Name: RP4-715N11.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
114-136
0.066
4
7mer
164-188
0.009
0
LOC101926960
hsa-miR-767-5p
0.977
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: NR_104636.1
Biotype: lincRNA
Gene id: NR_104636.1 (gene)
Gene Name: LOC101926960
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1576-1600
0.065
1
7mer
599-624
0.007
1
AC004447.2
hsa-miR-767-5p
0.977
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000594142
Biotype: antisense
Gene id: ENSG00000269131
Gene Name: AC004447.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2336-2361
0.072
2
XLOC_003341
hsa-miR-767-5p
0.973
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006715
Biotype: transcript isomorph
Gene id: XLOC_003341
Gene Name: XLOC_003341
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
59-81
0.058
1
7mer
491-510
0.011
0
RP11-706O15.7
hsa-miR-767-5p
0.972
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000381105
Biotype: lincRNA
Gene id: ENSG00000205662
Gene Name: RP11-706O15.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
171-187
0.059
1
7mer
1303-1316
0.010
0
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