LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-767-5p


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Gene
miRNA
Score
DIANA Links
LINC00461
hsa-miR-767-5p
0.738
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000509783
Biotype: lincRNA
Gene id: ENSG00000245526
Gene Name: LINC00461
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
570-590
0.028
3
LINC00515
hsa-miR-767-5p
0.738
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000567517
Biotype: antisense
Gene id: ENSG00000260583
Gene Name: LINC00515
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
277-302
0.028
0
RP11-471L13.2
hsa-miR-767-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000585228
Biotype: lincRNA
Gene id: ENSG00000265400
Gene Name: RP11-471L13.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
29-53
0.026
0
6mer
8-29
0.002
0
RP5-1009E24.9
hsa-miR-767-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000620777
Biotype: processed_transcript
Gene id: ENSG00000274949
Gene Name: RP5-1009E24.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
481-501
0.019
5
7mer
144-168
0.006
1
6mer
173-194
0.002
1
CTC-546K23.1
hsa-miR-767-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000594690
Biotype: lincRNA
Gene id: ENSG00000229855
Gene Name: CTC-546K23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
559-579
0.028
1
LINC01192
hsa-miR-767-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000492553
Biotype: lincRNA
Gene id: ENSG00000241369
Gene Name: LINC01192
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
415-438
0.016
0
6mer
131-153
0.007
1
6mer
283-303
0.005
0
XLOC_000190
hsa-miR-767-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000937
Biotype: transcript isomorph
Gene id: XLOC_000190
Gene Name: XLOC_000190
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3138-3159
0.018
0
9mer
2668-2685
0.008
1
7mer
2717-2733
0.001
0
RP11-248J18.2
hsa-miR-767-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000602954
Biotype: sense_intronic
Gene id: ENSG00000269906
Gene Name: RP11-248J18.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
576-597
0.028
2
SH3PXD2A-AS1
hsa-miR-767-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: NR_038940.1
Biotype: antisense
Gene id: NR_038940.1 (gene)
Gene Name: SH3PXD2A-AS1
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1574-1598
0.028
0
RP11-513O17.2
hsa-miR-767-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000523341
Biotype: lincRNA
Gene id: ENSG00000253301
Gene Name: RP11-513O17.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
546-569
0.027
1
XLOC_005273
hsa-miR-767-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011799
Biotype: transcript isomorph
Gene id: XLOC_005273
Gene Name: XLOC_005273
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Colon Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
895-916
0.027
1
CTA-292E10.9
hsa-miR-767-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623127
Biotype: antisense
Gene id: ENSG00000280111
Gene Name: CTA-292E10.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5695-5717
0.006
1
7mer
9656-9670
0.004
2
6mer
3160-3183
0.003
7
6mer
4320-4341
0.003
7
8mer
5227-5243
0.003
0
6mer
14860-14874
0.003
7
6mer
17662-17688
0.002
3
6mer
11759-11776
0.002
8
6mer
14289-14313
0.001
1
RP1-153G14.4
hsa-miR-767-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000607727
Biotype: lincRNA
Gene id: ENSG00000271755
Gene Name: RP1-153G14.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2640-2655
0.011
1
7mer
1139-1160
0.010
0
7mer
2212-2236
0.005
1
7mer
1402-1425
0.002
1
RP11-148B18.4
hsa-miR-767-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000414039
Biotype: lincRNA
Gene id: ENSG00000236098
Gene Name: RP11-148B18.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
- Kidney Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
388-410
0.025
1
8mer+mismatch
23-39
0.003
1
RP11-867G23.3
hsa-miR-767-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000501708
Biotype: lincRNA
Gene id: ENSG00000245156
Gene Name: RP11-867G23.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2355-2374
0.021
9
7mer
1207-1224
0.006
1
XLOC_007176
hsa-miR-767-5p
0.736
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00015126
Biotype: transcript isomorph
Gene id: XLOC_007176
Gene Name: XLOC_007176
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Kidney Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
619-645
0.027
2
XLOC_012862
hsa-miR-767-5p
0.735
mTTBlnEmP

Gene Details
Chromosome: chr18
Transcript: TCONS_00026541
Biotype: transcript isomorph
Gene id: XLOC_012862
Gene Name: XLOC_012862
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
343-370
0.012
0
8mer
173-194
0.010
1
6mer
598-623
0.005
4
KRBOX1-AS1
hsa-miR-767-5p
0.735
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000447834
Biotype: antisense
Gene id: ENSG00000206552
Gene Name: KRBOX1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
166-186
0.025
1
6mer
1612-1637
0.002
0
H19
hsa-miR-767-5p
0.735
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000439725
Biotype: lincRNA
Gene id: ENSG00000130600
Gene Name: H19
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
735-750
0.024
5
8mer
1116-1135
0.002
Not Conserved
6mer
1286-1308
0.001
0
PTPRG-AS1
hsa-miR-767-5p
0.735
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000490916
Biotype: antisense
Gene id: ENSG00000241472
Gene Name: PTPRG-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
221-234
0.025
1
6mer
407-431
0.002
0
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