LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-767-5p


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Gene
miRNA
Score
DIANA Links
RP11-1007O24.2
hsa-miR-767-5p
0.761
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000568345
Biotype: lincRNA
Gene id: ENSG00000261187
Gene Name: RP11-1007O24.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
218-238
0.015
0
8mer
556-582
0.014
1
RP11-12A16.3
hsa-miR-767-5p
0.761
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000437097
Biotype: antisense
Gene id: ENSG00000227068
Gene Name: RP11-12A16.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
415-437
0.030
2
XLOC_006953
hsa-miR-767-5p
0.761
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014883
Biotype: transcript isomorph
Gene id: XLOC_006953
Gene Name: XLOC_006953
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Placenta Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1277-1297
0.029
8
6mer
596-620
0.001
Not Conserved
AC000403.4
hsa-miR-767-5p
0.760
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000613696
Biotype: lincRNA
Gene id: ENSG00000278727
Gene Name: AC000403.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3425-3448
0.030
3
RP11-116D17.2
hsa-miR-767-5p
0.760
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000546696
Biotype: lincRNA
Gene id: ENSG00000257519
Gene Name: RP11-116D17.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
35-61
0.030
1
XLOC_013939
hsa-miR-767-5p
0.759
mTTBlnEmP

Gene Details
Chromosome: chr21
Transcript: TCONS_00029016
Biotype: transcript isomorph
Gene id: XLOC_013939
Gene Name: XLOC_013939
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Liver Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
831-853
0.029
0
RP11-149I9.2
hsa-miR-767-5p
0.759
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000570413
Biotype: antisense
Gene id: ENSG00000263167
Gene Name: RP11-149I9.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
214-238
0.024
3
6mer
241-263
0.005
3
RP11-1114I9.1
hsa-miR-767-5p
0.758
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000519983
Biotype: lincRNA
Gene id: ENSG00000253659
Gene Name: RP11-1114I9.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
22-47
0.029
0
LINC01237
hsa-miR-767-5p
0.757
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000430555
Biotype: lincRNA
Gene id: ENSG00000233806
Gene Name: LINC01237
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
785-805
0.016
1
7mer
206-228
0.011
Not Conserved
6mer
82-99
0.003
0
LINC00461
hsa-miR-767-5p
0.756
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000515885
Biotype: lincRNA
Gene id: ENSG00000245526
Gene Name: LINC00461
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
495-515
0.029
3
RP11-1046B16.3
hsa-miR-767-5p
0.756
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000611191
Biotype: sense_intronic
Gene id: ENSG00000273797
Gene Name: RP11-1046B16.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
398-420
0.029
4
SNX29P2
hsa-miR-767-5p
0.756
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000604430
Biotype: lincRNA
Gene id: ENSG00000198106
Gene Name: SNX29P2
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3587-3610
0.014
0
7mer
3015-3038
0.005
0
8mer
3298-3312
0.005
0
6mer
261-281
0.002
0
6mer
793-816
0.001
Not Conserved
6mer
903-921
0.001
4
7mer
861-884
0.001
Not Conserved
LINC00515
hsa-miR-767-5p
0.756
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: NR_024092.1
Biotype: lincRNA
Gene id: NR_024092.1 (gene)
Gene Name: LINC00515
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
272-297
0.029
0
RP11-266K4.14
hsa-miR-767-5p
0.755
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000618256
Biotype: lincRNA
Gene id: ENSG00000275367
Gene Name: RP11-266K4.14
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2181-2207
0.026
1
6mer
3286-3306
0.003
0
RP11-431D12.1
hsa-miR-767-5p
0.754
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000523232
Biotype: lincRNA
Gene id: ENSG00000253839
Gene Name: RP11-431D12.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
89-108
0.029
2
SNHG16
hsa-miR-767-5p
0.754
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000586942
Biotype: lincRNA
Gene id: ENSG00000163597
Gene Name: SNHG16
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
394-419
0.026
1
6mer
220-239
0.003
0
LOC101928398
hsa-miR-767-5p
0.753
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: NR_109926.1
Biotype: lincRNA
Gene id: NR_109926.1 (gene)
Gene Name: LOC101928398
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
629-651
0.029
0
AC009961.3
hsa-miR-767-5p
0.753
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000453016
Biotype: lincRNA
Gene id: ENSG00000226266
Gene Name: AC009961.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
160-184
0.021
2
6mer
342-364
0.008
8
RP11-347I19.7
hsa-miR-767-5p
0.753
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000613093
Biotype: lincRNA
Gene id: ENSG00000274292
Gene Name: RP11-347I19.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
277-301
0.029
7
XLOC_013773
hsa-miR-767-5p
0.752
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028422
Biotype: transcript isomorph
Gene id: XLOC_013773
Gene Name: XLOC_013773
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
361-386
0.005
1
6mer
153-178
0.004
1
6mer
5594-5618
0.003
0
6mer
575-592
0.003
1
6mer
258-283
0.003
0
6mer
788-813
0.002
0
6mer
2836-2851
0.001
0
6mer
5485-5503
0.001
Not Conserved
6mer
628-653
0.001
Not Conserved
6mer
3452-3470
0.001
0
6mer
2629-2654
0.001
0
6mer
1563-1588
0.001
Not Conserved
6mer
3239-3264
0.001
Not Conserved
6mer
1405-1422
0.001
Not Conserved
6mer
2517-2542
0.000
Not Conserved
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