LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-767-5p


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Gene
miRNA
Score
DIANA Links
XLOC_001935
hsa-miR-767-5p
0.782
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00005057
Biotype: transcript isomorph
Gene id: XLOC_001935
Gene Name: XLOC_001935
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
788-815
0.032
0
RP11-480C16.1
hsa-miR-767-5p
0.782
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000608834
Biotype: lincRNA
Gene id: ENSG00000272563
Gene Name: RP11-480C16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2741-2763
0.026
1
7mer
1898-1914
0.003
0
6mer
1069-1084
0.003
1
RP4-539M6.22
hsa-miR-767-5p
0.781
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000607893
Biotype: lincRNA
Gene id: ENSG00000273428
Gene Name: RP4-539M6.22
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
152-176
0.007
1
7mer
133-155
0.005
0
7mer
239-260
0.005
0
7mer
404-428
0.005
0
7mer
278-302
0.004
0
7mer
321-344
0.004
0
H19
hsa-miR-767-5p
0.780
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000411754
Biotype: lincRNA
Gene id: ENSG00000130600
Gene Name: H19
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
674-689
0.027
5
8mer
1059-1078
0.003
Not Conserved
6mer
1229-1251
0.002
0
XLOC_003411
hsa-miR-767-5p
0.780
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008728
Biotype: transcript isomorph
Gene id: XLOC_003411
Gene Name: XLOC_003411
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Colon Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
864-880
0.029
1
6mer
365-377
0.002
0
6mer
2265-2288
0.001
0
H19
hsa-miR-767-5p
0.779
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000446406
Biotype: lincRNA
Gene id: ENSG00000130600
Gene Name: H19
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
695-710
0.027
5
8mer
1080-1099
0.003
Not Conserved
6mer
1250-1268
0.002
0
RP11-491F9.5
hsa-miR-767-5p
0.779
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000564048
Biotype: lincRNA
Gene id: ENSG00000260769
Gene Name: RP11-491F9.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
646-666
0.031
1
RP11-374M1.4
hsa-miR-767-5p
0.778
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000421848
Biotype: lincRNA
Gene id: ENSG00000223379
Gene Name: RP11-374M1.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Lung Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
249-270
0.031
5
RP11-458K10.3
hsa-miR-767-5p
0.778
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000489626
Biotype: lincRNA
Gene id: ENSG00000243345
Gene Name: RP11-458K10.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
14-39
0.020
Not Conserved
7mer
96-121
0.011
Not Conserved
RP11-122K13.15
hsa-miR-767-5p
0.778
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000621752
Biotype: lincRNA
Gene id: ENSG00000274685
Gene Name: RP11-122K13.15
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
8-34
0.031
0
CTA-796E4.5
hsa-miR-767-5p
0.777
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624243
Biotype: lincRNA
Gene id: ENSG00000280065
Gene Name: CTA-796E4.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
27025-27048
0.014
2
7mer
6992-7015
0.007
2
7mer
15172-15189
0.003
0
6mer
10866-10892
0.002
3
6mer
13218-13242
0.002
2
6mer
19837-19856
0.001
0
6mer
11198-11221
0.001
1
6mer
28068-28086
0.001
2
6mer
8755-8769
0.000
0
FAM224A
hsa-miR-767-5p
0.777
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000419557
Biotype: lincRNA
Gene id: ENSG00000233522
Gene Name: FAM224A
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
822-846
0.024
0
6mer
1022-1041
0.007
0
GS1-72M22.1
hsa-miR-767-5p
0.776
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000607058
Biotype: antisense
Gene id: ENSG00000272163
Gene Name: GS1-72M22.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2484-2499
0.029
10
6mer
641-665
0.001
1
6mer
1290-1308
0.001
0
CTA-384D8.33
hsa-miR-767-5p
0.776
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000609758
Biotype: lincRNA
Gene id: ENSG00000272940
Gene Name: CTA-384D8.33
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
319-338
0.028
1
6mer
19-46
0.003
Not Conserved
RP3-323A16.1
hsa-miR-767-5p
0.775
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623959
Biotype: antisense
Gene id: ENSG00000279184
Gene Name: RP3-323A16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
49124-49143
0.004
1
7mer
34019-34044
0.004
0
7mer
28363-28379
0.004
0
7mer
11583-11603
0.004
1
7mer
6213-6238
0.003
0
7mer
44902-44918
0.003
0
7mer
32801-32816
0.002
0
8mer+mismatch
43172-43193
0.002
2
7mer
17834-17848
0.002
0
6mer
13591-13616
0.001
2
7mer
31654-31677
0.001
1
6mer
31617-31637
0.001
2
XLOC_011331
hsa-miR-767-5p
0.775
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023486
Biotype: transcript isomorph
Gene id: XLOC_011331
Gene Name: XLOC_011331
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
Fibroblasts Foreskin Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Testes Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
317-341
0.010
Not Conserved
7mer
904-928
0.010
2
7mer
1803-1825
0.007
0
6mer
600-612
0.003
2
AC009961.3
hsa-miR-767-5p
0.775
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000607836
Biotype: lincRNA
Gene id: ENSG00000226266
Gene Name: AC009961.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2274-2298
0.019
2
6mer
2456-2478
0.008
8
6mer
42-59
0.004
1
LINC00377
hsa-miR-767-5p
0.774
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000456588
Biotype: lincRNA
Gene id: ENSG00000229246
Gene Name: LINC00377
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
371-389
0.031
1
AC007392.4
hsa-miR-767-5p
0.773
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000433432
Biotype: lincRNA
Gene id: ENSG00000237179
Gene Name: AC007392.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Colon Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
444-463
0.031
12
AC007091.1
hsa-miR-767-5p
0.773
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000412563
Biotype: lincRNA
Gene id: ENSG00000223838
Gene Name: AC007091.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
139-161
0.031
0
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