LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-767-5p


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Gene
miRNA
Score
DIANA Links
XLOC_006128
hsa-miR-767-5p
0.807
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013480
Biotype: transcript isomorph
Gene id: XLOC_006128
Gene Name: XLOC_006128
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
223-245
0.034
1
RP11-489G11.3
hsa-miR-767-5p
0.805
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000563631
Biotype: lincRNA
Gene id: ENSG00000261646
Gene Name: RP11-489G11.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
869-890
0.029
1
6mer
1862-1877
0.004
1
FAM95B1
hsa-miR-767-5p
0.804
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000610972
Biotype: lincRNA
Gene id: ENSG00000274628
Gene Name: FAM95B1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1088-1115
0.032
0
6mer
1458-1474
0.002
Not Conserved
RP11-85B7.2
hsa-miR-767-5p
0.804
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000574307
Biotype: antisense
Gene id: ENSG00000262966
Gene Name: RP11-85B7.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
846-865
0.015
Not Conserved
8mer
4991-5012
0.013
1
8mer
2999-3023
0.005
0
7mer
1146-1166
0.002
0
AC005154.6
hsa-miR-767-5p
0.804
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000355837
Biotype: retained_intron
Gene id: ENSG00000196295
Gene Name: AC005154.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
7390-7415
0.011
1
7mer
13736-13761
0.008
1
7mer
14277-14295
0.005
1
7mer
10959-10983
0.005
1
7mer
10634-10655
0.002
1
7mer
3565-3587
0.002
0
6mer
6269-6292
0.001
0
RP1-46F2.3
hsa-miR-767-5p
0.803
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000548329
Biotype: lincRNA
Gene id: ENSG00000258240
Gene Name: RP1-46F2.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
193-213
0.034
0
AC007740.1
hsa-miR-767-5p
0.802
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000446838
Biotype: antisense
Gene id: ENSG00000237750
Gene Name: AC007740.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1719-1735
0.026
1
8mer
2729-2754
0.008
1
RP11-875O11.2
hsa-miR-767-5p
0.801
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000501897
Biotype: antisense
Gene id: ENSG00000246130
Gene Name: RP11-875O11.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
505-521
0.029
1
7mer
1127-1143
0.005
0
LOC102659288
hsa-miR-767-5p
0.800
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_110015.1
Biotype: lincRNA
Gene id: NR_110015.1 (gene)
Gene Name: LOC102659288
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
24-50
0.025
1
7mer
225-245
0.009
0
CTA-228A9.4
hsa-miR-767-5p
0.800
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624072
Biotype: antisense
Gene id: ENSG00000279080
Gene Name: CTA-228A9.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
20207-20233
0.021
1
7mer
14867-14889
0.005
0
7mer
6229-6244
0.002
0
6mer
2736-2757
0.001
6
6mer
8368-8386
0.001
0
6mer
6995-7011
0.001
1
6mer
13910-13931
0.001
Not Conserved
6mer
14521-14533
0.001
0
RP1-46F2.3
hsa-miR-767-5p
0.800
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000546852
Biotype: lincRNA
Gene id: ENSG00000258240
Gene Name: RP1-46F2.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
221-241
0.033
0
RP11-2H8.2
hsa-miR-767-5p
0.799
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000552780
Biotype: lincRNA
Gene id: ENSG00000257410
Gene Name: RP11-2H8.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
175-190
0.025
1
6mer
1138-1163
0.008
2
RP11-89N17.4
hsa-miR-767-5p
0.799
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000440034
Biotype: lincRNA
Gene id: ENSG00000236494
Gene Name: RP11-89N17.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Kidney Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
658-678
0.033
0
RP11-354M20.3
hsa-miR-767-5p
0.798
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000451610
Biotype: antisense
Gene id: ENSG00000231104
Gene Name: RP11-354M20.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
748-770
0.026
3
7mer
189-205
0.007
Not Conserved
XLOC_008573
hsa-miR-767-5p
0.797
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018786
Biotype: transcript isomorph
Gene id: XLOC_008573
Gene Name: XLOC_008573
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1456-1478
0.033
0
RP11-452K12.4
hsa-miR-767-5p
0.797
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000445808
Biotype: antisense
Gene id: ENSG00000225850
Gene Name: RP11-452K12.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
726-748
0.033
0
RP11-74J13.8
hsa-miR-767-5p
0.796
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000619407
Biotype: antisense
Gene id: ENSG00000278390
Gene Name: RP11-74J13.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
350-377
0.033
1
AP000855.4
hsa-miR-767-5p
0.796
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000433210
Biotype: lincRNA
Gene id: ENSG00000231620
Gene Name: AP000855.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
24-45
0.033
Not Conserved
RP11-88L24.4
hsa-miR-767-5p
0.796
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000582038
Biotype: antisense
Gene id: ENSG00000266413
Gene Name: RP11-88L24.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1810-1834
0.033
2
LOC102659288
hsa-miR-767-5p
0.795
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_110014.1
Biotype: lincRNA
Gene id: NR_110014.1 (gene)
Gene Name: LOC102659288
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
24-50
0.025
1
7mer
293-313
0.008
0
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