LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-767-5p


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Gene
miRNA
Score
DIANA Links
RP11-1102P16.1
hsa-miR-767-5p
0.821
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000523987
Biotype: lincRNA
Gene id: ENSG00000253379
Gene Name: RP11-1102P16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
131-148
0.036
1
XLOC_010255
hsa-miR-767-5p
0.820
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020990
Biotype: transcript isomorph
Gene id: XLOC_010255
Gene Name: XLOC_010255
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
486-505
0.035
0
MIR663AHG
hsa-miR-767-5p
0.819
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000597267
Biotype: lincRNA
Gene id: ENSG00000227195
Gene Name: MIR663AHG
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
- Lung Normal/Primary
- Testes Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
494-516
0.035
1
CTBP1-AS2
hsa-miR-767-5p
0.819
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000505364
Biotype: antisense
Gene id: ENSG00000196810
Gene Name: CTBP1-AS2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
676-689
0.035
Not Conserved
AC024560.2
hsa-miR-767-5p
0.818
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000424493
Biotype: lincRNA
Gene id: ENSG00000236833
Gene Name: AC024560.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1083-1097
0.035
0
CTA-342B11.3
hsa-miR-767-5p
0.817
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624235
Biotype: lincRNA
Gene id: ENSG00000280370
Gene Name: CTA-342B11.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
17391-17418
0.017
1
7mer
11477-11496
0.005
1
7mer
9470-9486
0.002
Not Conserved
6mer
4391-4412
0.002
1
7mer
22948-22972
0.002
Not Conserved
6mer
6236-6259
0.002
1
6mer
23676-23690
0.002
0
6mer
9744-9765
0.001
0
6mer
15826-15845
0.001
0
6mer
4924-4939
0.001
1
7mer
17446-17462
0.001
1
KCNA3
hsa-miR-767-5p
0.817
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000566942
Biotype: lincRNA
Gene id: ENSG00000259834
Gene Name: KCNA3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2559-2585
0.033
0
6mer
3048-3067
0.002
1
FAM95B1
hsa-miR-767-5p
0.816
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000610473
Biotype: lincRNA
Gene id: ENSG00000274628
Gene Name: FAM95B1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
413-440
0.035
0
XLOC_007765
hsa-miR-767-5p
0.815
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00016396
Biotype: transcript isomorph
Gene id: XLOC_007765
Gene Name: XLOC_007765
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Ovary Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
437-459
0.021
0
6mer
769-795
0.014
1
LOC100129316
hsa-miR-767-5p
0.814
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: NR_033912.1
Biotype: lincRNA
Gene id: NR_033912.1 (gene)
Gene Name: LOC100129316
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1361-1378
0.017
0
7mer
4953-4969
0.011
0
9mer
2326-2346
0.004
Not Conserved
8mer
3960-3981
0.002
Not Conserved
6mer
2675-2698
0.001
1
TTTY5
hsa-miR-767-5p
0.812
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000400581
Biotype: lincRNA
Gene id: ENSG00000215560
Gene Name: TTTY5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
711-734
0.034
0
6mer
1004-1027
0.001
Not Conserved
XLOC_008330
hsa-miR-767-5p
0.812
mTTBlnEmP

Gene Details
Chromosome: chrY
Transcript: TCONS_00017593
Biotype: transcript isomorph
Gene id: XLOC_008330
Gene Name: XLOC_008330
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
710-733
0.034
0
6mer
1003-1026
0.001
Not Conserved
GTF3C2-AS1
hsa-miR-767-5p
0.812
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000588707
Biotype: antisense
Gene id: ENSG00000234945
Gene Name: GTF3C2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
444-466
0.035
1
RP11-545A16.1
hsa-miR-767-5p
0.812
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000569644
Biotype: antisense
Gene id: ENSG00000261250
Gene Name: RP11-545A16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3161-3187
0.035
0
XLOC_010150
hsa-miR-767-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020868
Biotype: transcript isomorph
Gene id: XLOC_010150
Gene Name: XLOC_010150
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
67-85
0.030
0
6mer
35-50
0.005
1
C21orf15
hsa-miR-767-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: NR_026755.1
Biotype: lincRNA
Gene id: NR_026755.1 (gene)
Gene Name: C21orf15
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
853-879
0.025
0
6mer
68-84
0.005
0
6mer
978-1002
0.005
0
XLOC_008141
hsa-miR-767-5p
0.808
mTTBlnEmP

Gene Details
Chromosome: chrX
Transcript: TCONS_00017307
Biotype: transcript isomorph
Gene id: XLOC_008141
Gene Name: XLOC_008141
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
472-492
0.023
1
7mer
110-130
0.012
0
PRMT5-AS1
hsa-miR-767-5p
0.808
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000599580
Biotype: antisense
Gene id: ENSG00000237054
Gene Name: PRMT5-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
751-771
0.025
6
6mer
786-806
0.005
4
6mer
29-52
0.004
4
LINC00640
hsa-miR-767-5p
0.808
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000555801
Biotype: lincRNA
Gene id: ENSG00000258479
Gene Name: LINC00640
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
296-319
0.034
0
TMEM220-AS1
hsa-miR-767-5p
0.807
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000579114
Biotype: antisense
Gene id: ENSG00000263400
Gene Name: TMEM220-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
487-505
0.034
0
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