LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-708-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
LOC100506472
hsa-miR-708-5p
0.732
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: NR_040535.1
Biotype: sense
Gene id: NR_040535.1 (gene)
Gene Name: LOC100506472
UCSC graphic: -
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
838-863
0.016
1
8mer
1268-1291
0.011
2
6mer
1408-1425
0.001
0
RP11-930O11.1
hsa-miR-708-5p
0.732
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000560924
Biotype: lincRNA
Gene id: ENSG00000259719
Gene Name: RP11-930O11.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
35-56
0.017
0
6mer
505-528
0.006
0
6mer
34-41
0.004
1
XLOC_013142
hsa-miR-708-5p
0.732
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00027619
Biotype: transcript isomorph
Gene id: XLOC_013142
Gene Name: XLOC_013142
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
686-707
0.025
0
6mer
135-158
0.003
0
LINC00638
hsa-miR-708-5p
0.731
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000555578
Biotype: lincRNA
Gene id: ENSG00000258701
Gene Name: LINC00638
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
291-316
0.021
1
6mer
1165-1184
0.006
1
RP11-89N17.1
hsa-miR-708-5p
0.731
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000311067
Biotype: lincRNA
Gene id: ENSG00000173862
Gene Name: RP11-89N17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
436-458
0.013
4
6mer
240-259
0.005
3
6mer
310-335
0.005
5
6mer
305-329
0.002
1
6mer
494-509
0.002
1
RP11-147L13.8
hsa-miR-708-5p
0.730
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000591222
Biotype: lincRNA
Gene id: ENSG00000267731
Gene Name: RP11-147L13.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
286-305
0.012
Not Conserved
6mer
31-45
0.009
0
6mer
836-859
0.004
0
6mer
836-863
0.002
0
XLOC_006809
hsa-miR-708-5p
0.730
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014492
Biotype: transcript isomorph
Gene id: XLOC_006809
Gene Name: XLOC_006809
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Heart Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2200-2215
0.020
1
6mer
695-717
0.004
2
6mer
321-347
0.003
0
CTD-2339F6.1
hsa-miR-708-5p
0.730
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000518934
Biotype: lincRNA
Gene id: ENSG00000254139
Gene Name: CTD-2339F6.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2200-2215
0.020
1
6mer
695-717
0.004
2
6mer
321-347
0.003
0
RP11-309H21.3
hsa-miR-708-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000563320
Biotype: lincRNA
Gene id: ENSG00000261642
Gene Name: RP11-309H21.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
155-171
0.011
0
6mer
323-335
0.009
0
6mer
1142-1162
0.007
0
RP4-671O14.6
hsa-miR-708-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624919
Biotype: sense_overlapping
Gene id: ENSG00000280434
Gene Name: RP4-671O14.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
8447-8470
0.003
0
6mer
1280-1299
0.002
1
6mer
7100-7111
0.002
1
6mer
12070-12095
0.002
1
6mer
9169-9193
0.002
1
6mer
5665-5685
0.002
2
6mer
4615-4632
0.002
1
6mer
3618-3640
0.001
1
6mer
3871-3897
0.001
1
7mer
3989-4014
0.001
2
6mer
6382-6398
0.001
0
7mer
6109-6128
0.001
0
6mer
10108-10120
0.001
1
6mer
4717-4743
0.001
2
6mer
3977-3998
0.001
1
6mer
4145-4160
0.001
1
6mer
5756-5775
0.001
1
7mer
7424-7446
0.001
1
6mer
6464-6475
0.001
2
6mer
9225-9252
0.001
1
6mer
5773-5793
0.000
2
RP11-554D14.6
hsa-miR-708-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000551629
Biotype: lincRNA
Gene id: ENSG00000257398
Gene Name: RP11-554D14.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
79-100
0.016
0
6mer
196-221
0.011
0
PROX1-AS1
hsa-miR-708-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000601335
Biotype: antisense
Gene id: ENSG00000230461
Gene Name: PROX1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
437-459
0.027
7
AC005863.1
hsa-miR-708-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000379640
Biotype: lincRNA
Gene id: ENSG00000205325
Gene Name: AC005863.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2092-2107
0.022
0
6mer
2848-2870
0.005
1
FAM95B1
hsa-miR-708-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000585417
Biotype: lincRNA
Gene id: ENSG00000223839
Gene Name: FAM95B1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
153-179
0.027
0
TTTY4
hsa-miR-708-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000436568
Biotype: lincRNA
Gene id: ENSG00000226906
Gene Name: TTTY4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
469-485
0.027
0
RP4-806M20.3
hsa-miR-708-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000601795
Biotype: lincRNA
Gene id: ENSG00000268333
Gene Name: RP4-806M20.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1045-1065
0.027
0
XLOC_008332
hsa-miR-708-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: chrY
Transcript: TCONS_00017595
Biotype: transcript isomorph
Gene id: XLOC_008332
Gene Name: XLOC_008332
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
861-877
0.027
0
XLOC_008301
hsa-miR-708-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: chrY
Transcript: TCONS_00017580
Biotype: transcript isomorph
Gene id: XLOC_008301
Gene Name: XLOC_008301
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
469-485
0.027
0
XLOC_008302
hsa-miR-708-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: chrY
Transcript: TCONS_00017581
Biotype: transcript isomorph
Gene id: XLOC_008302
Gene Name: XLOC_008302
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
469-485
0.027
0
XLOC_012529
hsa-miR-708-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025701
Biotype: transcript isomorph
Gene id: XLOC_012529
Gene Name: XLOC_012529
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
554-569
0.009
0
6mer
5647-5662
0.007
5
7mer
2365-2389
0.005
1
6mer
4573-4600
0.002
2
6mer
574-594
0.002
0
6mer
786-804
0.001
2
6mer
2356-2378
0.001
2
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept