LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-520h


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
XLOC_003546
hsa-miR-520h
0.701
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00007535
Biotype: transcript isomorph
Gene id: XLOC_003546
Gene Name: XLOC_003546
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
53-74
0.011
4
7mer
2541-2549
0.006
0
8mer
2544-2562
0.004
Not Conserved
6mer
1138-1155
0.002
1
6mer
2572-2591
0.002
1
XLOC_005238
hsa-miR-520h
0.701
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012453
Biotype: transcript isomorph
Gene id: XLOC_005238
Gene Name: XLOC_005238
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
241-253
0.015
2
6mer
220-245
0.010
2
RP11-295I5.3
hsa-miR-520h
0.701
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000612734
Biotype: antisense
Gene id: ENSG00000274987
Gene Name: RP11-295I5.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
524-542
0.025
1
CTC-360G5.9
hsa-miR-520h
0.701
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000599320
Biotype: lincRNA
Gene id: ENSG00000269486
Gene Name: CTC-360G5.9
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
359-376
0.014
Not Conserved
7mer
3077-3102
0.005
Not Conserved
6mer
437-457
0.003
Not Conserved
7mer
2397-2408
0.003
Not Conserved
CTD-2528L19.6
hsa-miR-520h
0.700
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000588040
Biotype: lincRNA
Gene id: ENSG00000267152
Gene Name: CTD-2528L19.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
362-376
0.010
0
8mer
1207-1224
0.008
0
6mer
288-293
0.006
1
RP11-360K13.1
hsa-miR-520h
0.700
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000527528
Biotype: lincRNA
Gene id: ENSG00000254587
Gene Name: RP11-360K13.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1141-1158
0.016
1
6mer
355-371
0.005
2
6mer
400-411
0.003
2
XLOC_012977
hsa-miR-520h
0.700
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00026773
Biotype: transcript isomorph
Gene id: XLOC_012977
Gene Name: XLOC_012977
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
HeLa Cervix Cancer/Malignant
- Kidney Normal/Primary
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
721-737
0.009
0
8mer
495-512
0.008
1
8mer
191-216
0.007
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept