LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-520h


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
LINC01301
hsa-miR-520h
0.730
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000506428
Biotype: lincRNA
Gene id: ENSG00000251396
Gene Name: LINC01301
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
1893-1910
0.010
10
8mer
239-256
0.009
0
7mer
2162-2176
0.008
2
RP11-732A21.2
hsa-miR-520h
0.730
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000566440
Biotype: lincRNA
Gene id: ENSG00000260008
Gene Name: RP11-732A21.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
246-262
0.018
3
7mer
560-569
0.006
1
6mer
1275-1280
0.003
0
XLOC_009797
hsa-miR-520h
0.730
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020464
Biotype: transcript isomorph
Gene id: XLOC_009797
Gene Name: XLOC_009797
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Colon Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
352-377
0.027
3
C15orf37
hsa-miR-520h
0.730
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000560255
Biotype: antisense
Gene id: ENSG00000259642
Gene Name: C15orf37
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1867-1877
0.006
0
7mer
1376-1400
0.005
1
6mer
4164-4187
0.004
0
6mer
514-518
0.003
1
6mer
3982-4007
0.002
0
6mer
3930-3957
0.002
0
6mer
2833-2847
0.002
0
7mer
3218-3238
0.002
0
6mer
2171-2180
0.002
0
SC22CB-109E1.1
hsa-miR-520h
0.730
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623290
Biotype: lincRNA
Gene id: ENSG00000279582
Gene Name: SC22CB-109E1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2151-2163
0.009
1
7mer
9711-9730
0.007
0
7mer
5989-6004
0.003
1
7mer
3986-4010
0.003
0
6mer
4689-4711
0.003
2
7mer
2566-2587
0.002
0
RP11-588H23.3
hsa-miR-520h
0.729
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000548687
Biotype: antisense
Gene id: ENSG00000258168
Gene Name: RP11-588H23.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
654-669
0.005
3
8mer
5491-5508
0.005
0
7mer
2724-2739
0.005
1
6mer
868-892
0.003
3
6mer
3702-3713
0.003
6
6mer
3142-3158
0.003
2
6mer
1450-1464
0.002
1
6mer
4070-4093
0.002
1
AY269186.2
hsa-miR-520h
0.729
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000426697
Biotype: lincRNA
Gene id: ENSG00000224918
Gene Name: AY269186.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
238-260
0.014
8
6mer
256-275
0.013
6
RP11-381O7.3
hsa-miR-520h
0.729
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000426350
Biotype: lincRNA
Gene id: ENSG00000182021
Gene Name: RP11-381O7.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1465-1471
0.014
1
8mer
793-814
0.009
0
6mer
971-981
0.003
0
6mer
772-798
0.001
0
XLOC_005575
hsa-miR-520h
0.729
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012041
Biotype: transcript isomorph
Gene id: XLOC_005575
Gene Name: XLOC_005575
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
500-520
0.027
0
AC002454.1
hsa-miR-520h
0.729
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000419668
Biotype: antisense
Gene id: ENSG00000237819
Gene Name: AC002454.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
443-465
0.027
8
RP11-338L22.2
hsa-miR-520h
0.728
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000584258
Biotype: antisense
Gene id: ENSG00000263477
Gene Name: RP11-338L22.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
640-660
0.009
1
6mer
549-566
0.008
3
6mer
488-506
0.006
1
6mer
460-479
0.004
0
AP001442.2
hsa-miR-520h
0.728
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000617755
Biotype: antisense
Gene id: ENSG00000233783
Gene Name: AP001442.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
545-570
0.027
0
XLOC_011116
hsa-miR-520h
0.728
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022339
Biotype: transcript isomorph
Gene id: XLOC_011116
Gene Name: XLOC_011116
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Placenta Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
716-721
0.013
7
6mer
512-523
0.009
9
6mer
1181-1192
0.005
3
FAR2P2
hsa-miR-520h
0.728
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_046258.1
Biotype: lincRNA
Gene id: NR_046258.1 (gene)
Gene Name: FAR2P2
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2638-2659
0.012
0
8mer
2778-2795
0.009
0
6mer
247-267
0.004
Not Conserved
6mer
390-409
0.002
Not Conserved
XLOC_012151
hsa-miR-520h
0.728
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025338
Biotype: transcript isomorph
Gene id: XLOC_012151
Gene Name: XLOC_012151
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
243-259
0.018
2
6mer
278-296
0.005
1
6mer
398-410
0.004
1
RP11-76E12.1
hsa-miR-520h
0.728
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000355909
Biotype: lincRNA
Gene id: ENSG00000197176
Gene Name: RP11-76E12.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
720-725
0.013
7
6mer
516-527
0.009
9
6mer
1185-1196
0.005
3
RP11-276H19.1
hsa-miR-520h
0.728
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000415801
Biotype: lincRNA
Gene id: ENSG00000226237
Gene Name: RP11-276H19.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3989-3999
0.009
1
7mer
3432-3455
0.005
1
6mer
4083-4102
0.004
1
6mer
4011-4034
0.004
0
6mer
2912-2933
0.003
1
6mer
3356-3378
0.002
0
TPTEP1
hsa-miR-520h
0.728
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000585784
Biotype: lincRNA
Gene id: ENSG00000100181
Gene Name: TPTEP1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
274-293
0.027
0
ST7-AS2
hsa-miR-520h
0.728
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000432541
Biotype: antisense
Gene id: ENSG00000226367
Gene Name: ST7-AS2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
894-909
0.018
3
7mer
473-493
0.009
1
RP1-266L20.9
hsa-miR-520h
0.727
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000586101
Biotype: sense_intronic
Gene id: ENSG00000266896
Gene Name: RP1-266L20.9
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1364-1381
0.010
1
6mer
107-124
0.007
2
6mer
517-522
0.006
1
6mer
412-433
0.004
Not Conserved
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept