LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-520h


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
ZNF561-AS1
hsa-miR-520h
0.985
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000587536
Biotype: antisense
Gene id: ENSG00000267106
Gene Name: ZNF561-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
101-118
0.067
1
6mer
1373-1397
0.007
0
6mer
1393-1411
0.005
0
RP11-586K12.10
hsa-miR-520h
0.984
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000570183
Biotype: lincRNA
Gene id: ENSG00000260311
Gene Name: RP11-586K12.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1879-1904
0.054
0
7mer
2007-2028
0.018
0
6mer
1320-1337
0.007
0
RP11-340I6.8
hsa-miR-520h
0.984
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000450544
Biotype: lincRNA
Gene id: ENSG00000226581
Gene Name: RP11-340I6.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
247-267
0.078
0
RP11-244B22.6
hsa-miR-520h
0.984
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000564059
Biotype: lincRNA
Gene id: ENSG00000261398
Gene Name: RP11-244B22.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
951-976
0.046
0
6mer
182-198
0.016
0
7mer
1080-1101
0.015
0
LA16c-306A4.1
hsa-miR-520h
0.982
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000569106
Biotype: antisense
Gene id: ENSG00000260022
Gene Name: LA16c-306A4.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
37-53
0.054
1
6mer
353-370
0.022
1
RP11-1437A8.4
hsa-miR-520h
0.979
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000563960
Biotype: lincRNA
Gene id: ENSG00000260827
Gene Name: RP11-1437A8.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
583-608
0.051
0
7mer
459-480
0.016
0
6mer
1150-1167
0.006
0
RP11-57A19.5
hsa-miR-520h
0.978
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000602838
Biotype: lincRNA
Gene id: ENSG00000270118
Gene Name: RP11-57A19.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
96-114
0.056
0
6mer
311-323
0.017
0
CTA-796E4.5
hsa-miR-520h
0.977
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624243
Biotype: lincRNA
Gene id: ENSG00000280065
Gene Name: CTA-796E4.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
31178-31189
0.019
0
7mer
3286-3305
0.004
1
8mer
9304-9321
0.003
1
7mer
3481-3496
0.003
1
7mer
8798-8813
0.003
2
7mer
7554-7570
0.003
0
6mer
15297-15315
0.002
1
6mer
16922-16936
0.002
2
6mer
19698-19717
0.002
1
6mer
12806-12832
0.002
2
6mer
9638-9657
0.002
1
6mer
17608-17630
0.002
1
6mer
8164-8187
0.002
1
6mer
11622-11640
0.002
0
6mer
12963-12978
0.002
5
6mer
9099-9121
0.002
1
6mer
29346-29356
0.002
1
6mer
3822-3836
0.002
2
7mer
27138-27151
0.002
Not Conserved
7mer
8651-8674
0.002
1
6mer
25170-25191
0.002
Not Conserved
7mer
19766-19787
0.001
1
6mer
30548-30553
0.001
0
6mer
17288-17301
0.001
0
6mer
28689-28714
0.001
Not Conserved
6mer
15568-15587
0.001
0
6mer
8552-8568
0.001
0
6mer
17372-17394
0.001
1
ZNF561-AS1
hsa-miR-520h
0.976
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000591056
Biotype: antisense
Gene id: ENSG00000267106
Gene Name: ZNF561-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
99-116
0.057
1
7mer
505-510
0.014
0
XLOC_000199
hsa-miR-520h
0.975
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000200
Biotype: transcript isomorph
Gene id: XLOC_000199
Gene Name: XLOC_000199
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Liver Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1986-2003
0.058
1
6mer
601-624
0.013
1
XLOC_001668
hsa-miR-520h
0.975
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003870
Biotype: transcript isomorph
Gene id: XLOC_001668
Gene Name: XLOC_001668
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
5162-5179
0.042
1
8mer
5639-5656
0.018
0
6mer
3692-3710
0.007
1
6mer
3146-3161
0.003
0
ZNF561-AS1
hsa-miR-520h
0.974
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000585797
Biotype: antisense
Gene id: ENSG00000267106
Gene Name: ZNF561-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
113-130
0.056
1
6mer
1308-1332
0.008
0
6mer
1328-1346
0.006
0
XLOC_001576
hsa-miR-520h
0.973
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004852
Biotype: transcript isomorph
Gene id: XLOC_001576
Gene Name: XLOC_001576
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
21-47
0.069
1
XLOC_013010
hsa-miR-520h
0.973
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00026952
Biotype: transcript isomorph
Gene id: XLOC_013010
Gene Name: XLOC_013010
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1541-1560
0.023
0
7mer
1602-1627
0.023
0
6mer
35-59
0.016
0
7mer
1576-1594
0.008
Not Conserved
TTTY15
hsa-miR-520h
0.971
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: NR_001545.2
Biotype: lincRNA
Gene id: NR_001545.2 (gene)
Gene Name: TTTY15
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
66-80
0.022
0
8mer
2927-2944
0.020
0
6mer
2600-2618
0.008
0
6mer
2269-2294
0.007
0
6mer
1740-1756
0.006
0
6mer
1783-1807
0.003
0
6mer
3598-3621
0.002
Not Conserved
XLOC_008328
hsa-miR-520h
0.971
mTTBlnEmP

Gene Details
Chromosome: chrY
Transcript: TCONS_00017652
Biotype: transcript isomorph
Gene id: XLOC_008328
Gene Name: XLOC_008328
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Heart Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
842-859
0.044
0
7mer
1237-1252
0.022
0
6mer
322-342
0.003
Not Conserved
RP11-532N4.2
hsa-miR-520h
0.970
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000587106
Biotype: antisense
Gene id: ENSG00000235535
Gene Name: RP11-532N4.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2858-2863
0.055
10
7mer
2515-2540
0.010
0
6mer
1827-1852
0.003
0
CTA-292E10.9
hsa-miR-520h
0.969
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623127
Biotype: antisense
Gene id: ENSG00000280111
Gene Name: CTA-292E10.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
11426-11443
0.009
1
8mer
18580-18601
0.008
1
7mer
1131-1147
0.006
1
6mer
24896-24917
0.005
1
6mer
24680-24704
0.004
1
6mer
24310-24328
0.004
2
6mer
2684-2688
0.003
4
8mer
20055-20072
0.003
0
6mer
3472-3493
0.003
6
7mer
13160-13179
0.003
1
7mer
8996-9012
0.003
3
7mer
8943-8959
0.003
0
6mer
4782-4806
0.002
4
9mer
5246-5263
0.002
0
8mer
18913-18930
0.002
0
6mer
13832-13848
0.002
1
6mer
12392-12417
0.001
1
6mer
2777-2799
0.001
Not Conserved
6mer
7116-7139
0.001
0
6mer
21397-21420
0.001
0
6mer
9008-9035
0.001
0
RP11-440L14.1
hsa-miR-520h
0.969
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000503405
Biotype: antisense
Gene id: ENSG00000249592
Gene Name: RP11-440L14.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
205-224
0.067
1
RP11-799D4.4
hsa-miR-520h
0.969
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000588697
Biotype: antisense
Gene id: ENSG00000266947
Gene Name: RP11-799D4.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
261-278
0.055
1
7mer
31-44
0.012
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept