LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-520h


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
XLOC_012593
hsa-miR-520h
0.791
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025154
Biotype: transcript isomorph
Gene id: XLOC_012593
Gene Name: XLOC_012593
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
187-202
0.016
0
8mer
242-267
0.016
0
AC113607.2
hsa-miR-520h
0.790
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000445279
Biotype: lincRNA
Gene id: ENSG00000228799
Gene Name: AC113607.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4-30
0.032
1
AC067959.1
hsa-miR-520h
0.789
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000457901
Biotype: lincRNA
Gene id: ENSG00000233005
Gene Name: AC067959.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
486-497
0.011
2
7mer
60-80
0.007
1
7mer
388-409
0.007
1
6mer
75-87
0.004
0
6mer
212-239
0.004
0
XLOC_009783
hsa-miR-520h
0.788
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020451
Biotype: transcript isomorph
Gene id: XLOC_009783
Gene Name: XLOC_009783
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
749-767
0.013
0
6mer
1007-1027
0.011
0
6mer
817-833
0.008
0
XLOC_011309
hsa-miR-520h
0.788
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023980
Biotype: transcript isomorph
Gene id: XLOC_011309
Gene Name: XLOC_011309
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
689-707
0.028
1
6mer
232-246
0.004
Not Conserved
XLOC_010289
hsa-miR-520h
0.788
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00021708
Biotype: transcript isomorph
Gene id: XLOC_010289
Gene Name: XLOC_010289
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
- Testes Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
182-202
0.009
0
7mer
604-626
0.005
0
8mer
674-691
0.004
0
8mer
1143-1160
0.004
0
6mer
953-957
0.004
0
6mer
1703-1720
0.003
1
6mer
2293-2304
0.003
Not Conserved
RP4-717I23.3
hsa-miR-520h
0.788
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000415150
Biotype: antisense
Gene id: ENSG00000223745
Gene Name: RP4-717I23.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
81-86
0.032
8
RP11-686G23.2
hsa-miR-520h
0.787
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000526840
Biotype: lincRNA
Gene id: ENSG00000255178
Gene Name: RP11-686G23.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
736-753
0.013
0
6mer
1280-1302
0.010
6
6mer
15-34
0.006
0
6mer
297-315
0.003
0
LINC01089
hsa-miR-520h
0.787
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000535643
Biotype: lincRNA
Gene id: ENSG00000212694
Gene Name: LINC01089
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
931-948
0.016
13
6mer
770-787
0.016
14
AP001442.2
hsa-miR-520h
0.786
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000600590
Biotype: antisense
Gene id: ENSG00000233783
Gene Name: AP001442.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
158-183
0.029
0
6mer
810-827
0.003
1
AC078883.4
hsa-miR-520h
0.786
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000441212
Biotype: antisense
Gene id: ENSG00000226963
Gene Name: AC078883.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
193-219
0.032
5
CTD-2083E4.7
hsa-miR-520h
0.786
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000563761
Biotype: sense_overlapping
Gene id: ENSG00000261434
Gene Name: CTD-2083E4.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
193-219
0.020
1
7mer
470-496
0.012
1
CTD-2015H6.3
hsa-miR-520h
0.786
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000508000
Biotype: antisense
Gene id: ENSG00000249042
Gene Name: CTD-2015H6.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
339-362
0.021
1
8mer
837-854
0.011
1
CTD-2378E12.1
hsa-miR-520h
0.786
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000613161
Biotype: lincRNA
Gene id: ENSG00000273674
Gene Name: CTD-2378E12.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
58-78
0.024
0
6mer
2173-2193
0.004
0
6mer
447-465
0.004
1
LINC01089
hsa-miR-520h
0.785
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000541694
Biotype: lincRNA
Gene id: ENSG00000212694
Gene Name: LINC01089
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
795-812
0.016
13
6mer
634-651
0.015
14
XLOC_002727
hsa-miR-520h
0.785
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006125
Biotype: transcript isomorph
Gene id: XLOC_002727
Gene Name: XLOC_002727
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3271-3293
0.019
1
8mer
902-927
0.009
2
7mer
1047-1052
0.004
0
RP4-717I23.3
hsa-miR-520h
0.785
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000451302
Biotype: antisense
Gene id: ENSG00000223745
Gene Name: RP4-717I23.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
83-88
0.022
8
8mer
531-548
0.010
3
RP11-248N22.1
hsa-miR-520h
0.782
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000511346
Biotype: lincRNA
Gene id: ENSG00000250957
Gene Name: RP11-248N22.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
86-92
0.021
1
6mer
899-919
0.011
9
LL09NC01-254D11.1
hsa-miR-520h
0.782
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000564021
Biotype: antisense
Gene id: ENSG00000261018
Gene Name: LL09NC01-254D11.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1747-1760
0.012
2
9mer
1005-1026
0.007
1
6mer
88-115
0.006
1
6mer
623-647
0.005
2
6mer
946-966
0.002
1
RP1-86D1.2
hsa-miR-520h
0.782
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000434560
Biotype: sense_intronic
Gene id: ENSG00000228972
Gene Name: RP1-86D1.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1751-1772
0.021
0
6mer
1692-1714
0.010
3
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept