LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-519b-3p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
CTD-2524L6.3
hsa-miR-519b-3p
0.887
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000563041
Biotype: antisense
Gene id: ENSG00000260037
Gene Name: CTD-2524L6.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
547-570
0.044
7
RP11-13N13.5
hsa-miR-519b-3p
0.887
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000584148
Biotype: sense_intronic
Gene id: ENSG00000264188
Gene Name: RP11-13N13.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
309-327
0.023
0
7mer
147-165
0.021
0
CTA-292E10.9
hsa-miR-519b-3p
0.886
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623127
Biotype: antisense
Gene id: ENSG00000280111
Gene Name: CTA-292E10.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
342-360
0.010
1
7mer
24412-24431
0.007
0
8mer
18579-18600
0.007
1
7mer
20327-20349
0.003
0
6mer
22091-22103
0.003
1
6mer
10076-10090
0.003
3
7mer
20053-20071
0.002
0
6mer
17558-17571
0.002
0
6mer
15300-15323
0.001
0
7mer
5246-5261
0.001
0
6mer
18651-18676
0.001
2
6mer
13160-13178
0.001
1
6mer
11422-11441
0.001
1
7mer
20714-20732
0.001
0
7mer
18909-18929
0.001
0
MYO16-AS2
hsa-miR-519b-3p
0.885
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000412809
Biotype: antisense
Gene id: ENSG00000229938
Gene Name: MYO16-AS2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
11-28
0.028
1
9mer
242-253
0.016
1
XLOC_006850
hsa-miR-519b-3p
0.884
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014769
Biotype: transcript isomorph
Gene id: XLOC_006850
Gene Name: XLOC_006850
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1632-1645
0.023
5
6mer
1214-1238
0.008
6
6mer
1374-1399
0.008
5
6mer
1171-1188
0.005
3
XLOC_009414
hsa-miR-519b-3p
0.883
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019614
Biotype: transcript isomorph
Gene id: XLOC_009414
Gene Name: XLOC_009414
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1007-1029
0.023
0
6mer
26-47
0.010
4
6mer
271-287
0.008
2
7mer
1456-1481
0.003
0
LINC01002
hsa-miR-519b-3p
0.883
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000615457
Biotype: lincRNA
Gene id: ENSG00000206082
Gene Name: LINC01002
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
477-491
0.044
1
XLOC_008295
hsa-miR-519b-3p
0.883
mTTBlnEmP

Gene Details
Chromosome: chrY
Transcript: TCONS_00017578
Biotype: transcript isomorph
Gene id: XLOC_008295
Gene Name: XLOC_008295
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
A549 Lung Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2958-2976
0.009
0
6mer
3179-3190
0.008
0
6mer
1127-1141
0.008
0
6mer
3433-3446
0.007
0
6mer
3979-3996
0.007
0
7mer
4034-4052
0.005
0
TTTY15
hsa-miR-519b-3p
0.883
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: NR_001545.2
Biotype: lincRNA
Gene id: NR_001545.2 (gene)
Gene Name: TTTY15
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2925-2943
0.009
0
6mer
1094-1108
0.008
0
6mer
3146-3157
0.008
0
6mer
3400-3413
0.007
0
6mer
3946-3963
0.007
0
7mer
4001-4019
0.005
0
CTC-236F12.4
hsa-miR-519b-3p
0.882
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000506836
Biotype: lincRNA
Gene id: ENSG00000248727
Gene Name: CTC-236F12.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
166-192
0.023
0
7mer
419-434
0.010
1
7mer
202-218
0.006
0
7mer
56-82
0.005
0
TTTY15
hsa-miR-519b-3p
0.882
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000440408
Biotype: lincRNA
Gene id: ENSG00000233864
Gene Name: TTTY15
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2958-2976
0.009
0
6mer
3179-3190
0.008
0
6mer
1127-1141
0.008
0
6mer
3433-3446
0.007
0
6mer
3979-3996
0.007
0
7mer
4034-4052
0.005
0
PWRN2
hsa-miR-519b-3p
0.882
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000567246
Biotype: lincRNA
Gene id: ENSG00000260551
Gene Name: PWRN2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
571-596
0.027
1
6mer
3427-3452
0.005
0
6mer
2729-2733
0.003
0
8mer+mismatch
277-299
0.003
Not Conserved
6mer
221-239
0.003
Not Conserved
6mer
1509-1524
0.002
Not Conserved
RP1-309I22.2
hsa-miR-519b-3p
0.882
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624184
Biotype: sense_overlapping
Gene id: ENSG00000279338
Gene Name: RP1-309I22.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
26259-26284
0.006
11
6mer
28547-28566
0.005
1
7mer
4386-4402
0.004
1
6mer
24418-24437
0.004
6
6mer
22772-22789
0.003
8
6mer
22270-22291
0.003
3
7mer
636-651
0.003
1
7mer
26962-26987
0.003
1
6mer
15587-15597
0.002
2
6mer
13048-13064
0.002
1
6mer
20350-20366
0.001
1
6mer
14432-14452
0.001
2
6mer
18027-18044
0.001
1
6mer
10710-10731
0.001
1
6mer
27593-27608
0.001
1
6mer
2708-2732
0.001
0
6mer
18042-18056
0.000
1
HAGLR
hsa-miR-519b-3p
0.882
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000547207
Biotype: antisense
Gene id: ENSG00000224189
Gene Name: HAGLR
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
199-220
0.026
2
8mer
549-572
0.013
1
6mer
331-356
0.005
2
AC007750.5
hsa-miR-519b-3p
0.881
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_110255.1
Biotype: antisense
Gene id: NR_110255.1 (gene)
Gene Name: AC007750.5
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3367-3387
0.026
0
6mer
21-35
0.006
Not Conserved
8mer
1463-1484
0.006
0
6mer
3078-3094
0.005
0
6mer
1556-1560
0.001
3
RP11-345M22.2
hsa-miR-519b-3p
0.880
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000562921
Biotype: lincRNA
Gene id: ENSG00000261390
Gene Name: RP11-345M22.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
HREpiC Kidney Normal/Primary


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
295-319
0.021
7
8mer
1178-1190
0.013
1
6mer
1471-1494
0.004
1
6mer
868-881
0.003
0
6mer
852-879
0.002
1
RP11-553L6.5
hsa-miR-519b-3p
0.880
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000570269
Biotype: lincRNA
Gene id: ENSG00000259976
Gene Name: RP11-553L6.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
94-115
0.028
15
6mer
76-97
0.015
12
RP11-159H22.2
hsa-miR-519b-3p
0.880
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000525833
Biotype: antisense
Gene id: ENSG00000254862
Gene Name: RP11-159H22.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
83-103
0.026
4
6mer
1101-1124
0.011
6
7mer
624-639
0.007
0
RP1-167O22.1
hsa-miR-519b-3p
0.879
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000622928
Biotype: lincRNA
Gene id: ENSG00000279082
Gene Name: RP1-167O22.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
29-47
0.043
2
RP5-898I4.1
hsa-miR-519b-3p
0.879
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623740
Biotype: sense_overlapping
Gene id: ENSG00000280395
Gene Name: RP5-898I4.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
89-109
0.017
1
7mer
101-120
0.013
0
7mer
3391-3413
0.007
Not Conserved
8mer
2445-2468
0.004
0
6mer
1158-1182
0.003
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept