LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-519b-3p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
XLOC_006934
hsa-miR-519b-3p
0.751
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014865
Biotype: transcript isomorph
Gene id: XLOC_006934
Gene Name: XLOC_006934
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1422-1438
0.008
1
8mer
3809-3827
0.007
0
6mer
578-600
0.005
1
6mer
3443-3467
0.003
1
6mer
2461-2487
0.002
1
6mer
2274-2296
0.002
0
6mer
3317-3335
0.002
1
RGS5
hsa-miR-519b-3p
0.751
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000526176
Biotype: antisense
Gene id: ENSG00000232995
Gene Name: RGS5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
57-79
0.029
1
XLOC_011056
hsa-miR-519b-3p
0.751
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00023122
Biotype: transcript isomorph
Gene id: XLOC_011056
Gene Name: XLOC_011056
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
70-94
0.029
2
AC093590.1
hsa-miR-519b-3p
0.751
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000453035
Biotype: lincRNA
Gene id: ENSG00000238217
Gene Name: AC093590.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
312-333
0.029
2
LINC00889
hsa-miR-519b-3p
0.750
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: NR_026935.1
Biotype: lincRNA
Gene id: NR_026935.1 (gene)
Gene Name: LINC00889
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2564-2570
0.029
0
RP11-2H8.2
hsa-miR-519b-3p
0.750
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000552780
Biotype: lincRNA
Gene id: ENSG00000257410
Gene Name: RP11-2H8.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1156-1175
0.019
1
7mer
150-168
0.007
1
6mer
775-790
0.003
1
AC012594.1
hsa-miR-519b-3p
0.750
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000593861
Biotype: antisense
Gene id: ENSG00000231898
Gene Name: AC012594.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
257-271
0.029
1
KIZ-AS1
hsa-miR-519b-3p
0.750
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000616177
Biotype: antisense
Gene id: ENSG00000232712
Gene Name: KIZ-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
478-501
0.012
1
8mer
5144-5161
0.008
2
7mer
1261-1286
0.006
0
7mer
4598-4616
0.002
0
CTC-295J13.3
hsa-miR-519b-3p
0.750
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000513133
Biotype: lincRNA
Gene id: ENSG00000248109
Gene Name: CTC-295J13.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
116-141
0.029
4
CTD-2135D7.2
hsa-miR-519b-3p
0.749
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000575137
Biotype: antisense
Gene id: ENSG00000262732
Gene Name: CTD-2135D7.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
294-317
0.010
1
8mer
1672-1686
0.006
0
6mer
261-279
0.005
4
6mer
710-736
0.003
3
6mer
3551-3561
0.003
6
6mer
1706-1730
0.001
1
LINC01001
hsa-miR-519b-3p
0.749
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000527683
Biotype: lincRNA
Gene id: ENSG00000230724
Gene Name: LINC01001
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
561-575
0.029
0
XLOC_004839
hsa-miR-519b-3p
0.749
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00010350
Biotype: transcript isomorph
Gene id: XLOC_004839
Gene Name: XLOC_004839
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4098-4120
0.012
1
7mer
2592-2614
0.004
3
6mer
612-625
0.004
1
8mer
1029-1055
0.004
1
6mer
1266-1291
0.002
0
6mer
2266-2283
0.001
Not Conserved
6mer
1222-1237
0.001
Not Conserved
LINC01428
hsa-miR-519b-3p
0.749
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000449581
Biotype: lincRNA
Gene id: ENSG00000228888
Gene Name: LINC01428
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
174-200
0.029
1
RP11-933H2.4
hsa-miR-519b-3p
0.748
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000441345
Biotype: retained_intron
Gene id: ENSG00000250608
Gene Name: RP11-933H2.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
306-320
0.028
1
RP11-47I22.1
hsa-miR-519b-3p
0.748
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000556543
Biotype: antisense
Gene id: ENSG00000258926
Gene Name: RP11-47I22.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
287-307
0.012
2
6mer
200-211
0.011
5
6mer
313-317
0.005
1
LINC00511
hsa-miR-519b-3p
0.747
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000584749
Biotype: lincRNA
Gene id: ENSG00000227036
Gene Name: LINC00511
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
341-365
0.020
2
7mer
253-276
0.009
2
RP11-583F2.2
hsa-miR-519b-3p
0.747
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000583416
Biotype: lincRNA
Gene id: ENSG00000265912
Gene Name: RP11-583F2.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2268-2286
0.009
1
6mer
2004-2017
0.008
1
6mer
1754-1775
0.006
1
6mer
776-793
0.005
1
HCG18
hsa-miR-519b-3p
0.747
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000444126
Biotype: antisense
Gene id: ENSG00000231074
Gene Name: HCG18
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4076-4095
0.012
1
7mer
88-114
0.012
1
6mer
1039-1065
0.002
2
6mer
1304-1308
0.002
0
MLIP-AS1
hsa-miR-519b-3p
0.747
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000613661
Biotype: antisense
Gene id: ENSG00000235050
Gene Name: MLIP-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
519-538
0.028
3
MLIP-AS1
hsa-miR-519b-3p
0.746
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000587744
Biotype: antisense
Gene id: ENSG00000235050
Gene Name: MLIP-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-519b-3p
Sequence: aaagugcauccuuuuagagguu
MirBase ID: MIMAT0002837
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
354-373
0.028
3
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept