LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-4677-3p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
CXADRP3
hsa-miR-4677-3p
0.758
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000581457
Biotype: lincRNA
Gene id: ENSG00000265766
Gene Name: CXADRP3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4677-3p
Sequence: ucugugagaccaaagaacuacu
MirBase ID: MIMAT0019761
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
767-792
0.022
0
6mer
238-264
0.004
2
6mer
962-970
0.003
0
RP11-195M16.3
hsa-miR-4677-3p
0.758
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000565955
Biotype: lincRNA
Gene id: ENSG00000261055
Gene Name: RP11-195M16.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-4677-3p
Sequence: ucugugagaccaaagaacuacu
MirBase ID: MIMAT0019761
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
246-269
0.013
2
6mer
1706-1717
0.005
4
6mer
1546-1550
0.004
2
6mer
278-294
0.003
1
6mer
1426-1444
0.002
1
6mer
829-833
0.002
1
AP000344.3
hsa-miR-4677-3p
0.758
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000449711
Biotype: lincRNA
Gene id: ENSG00000234928
Gene Name: AP000344.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-4677-3p
Sequence: ucugugagaccaaagaacuacu
MirBase ID: MIMAT0019761
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
498-524
0.023
1
8mer
327-345
0.006
Not Conserved
LL09NC01-254D11.1
hsa-miR-4677-3p
0.758
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000564021
Biotype: antisense
Gene id: ENSG00000261018
Gene Name: LL09NC01-254D11.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4677-3p
Sequence: ucugugagaccaaagaacuacu
MirBase ID: MIMAT0019761
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1197-1213
0.015
1
7mer
1656-1676
0.007
1
6mer
1646-1650
0.003
1
6mer
695-706
0.002
1
6mer
1232-1254
0.002
1
XLOC_011976
hsa-miR-4677-3p
0.758
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00025033
Biotype: transcript isomorph
Gene id: XLOC_011976
Gene Name: XLOC_011976
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Ovary Normal/Primary


miRNA Details
Name: hsa-miR-4677-3p
Sequence: ucugugagaccaaagaacuacu
MirBase ID: MIMAT0019761
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
935-942
0.029
1
RP3-395M20.7
hsa-miR-4677-3p
0.758
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000456687
Biotype: antisense
Gene id: ENSG00000225931
Gene Name: RP3-395M20.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4677-3p
Sequence: ucugugagaccaaagaacuacu
MirBase ID: MIMAT0019761
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
218-245
0.015
1
7mer
1275-1286
0.014
0
IL10RB-AS1
hsa-miR-4677-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000411998
Biotype: antisense
Gene id: ENSG00000223799
Gene Name: IL10RB-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4677-3p
Sequence: ucugugagaccaaagaacuacu
MirBase ID: MIMAT0019761
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
302-321
0.014
0
7mer
1698-1703
0.006
0
7mer
1553-1569
0.004
1
6mer
291-296
0.003
1
6mer
771-786
0.003
1
RP11-862G15.2
hsa-miR-4677-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000555299
Biotype: lincRNA
Gene id: ENSG00000258499
Gene Name: RP11-862G15.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4677-3p
Sequence: ucugugagaccaaagaacuacu
MirBase ID: MIMAT0019761
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
476-483
0.019
4
6mer
1325-1351
0.006
1
6mer
1142-1146
0.005
1
RP11-434D11.4
hsa-miR-4677-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000509185
Biotype: lincRNA
Gene id: ENSG00000251072
Gene Name: RP11-434D11.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4677-3p
Sequence: ucugugagaccaaagaacuacu
MirBase ID: MIMAT0019761
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
851-856
0.020
1
6mer
5-30
0.009
2
XLOC_000118
hsa-miR-4677-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000879
Biotype: transcript isomorph
Gene id: XLOC_000118
Gene Name: XLOC_000118
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-4677-3p
Sequence: ucugugagaccaaagaacuacu
MirBase ID: MIMAT0019761
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
163-169
0.021
1
8mer
1281-1297
0.005
0
6mer
2278-2300
0.003
0
6mer
836-863
0.001
0
RP11-106D4.2
hsa-miR-4677-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000612833
Biotype: sense_intronic
Gene id: ENSG00000276337
Gene Name: RP11-106D4.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4677-3p
Sequence: ucugugagaccaaagaacuacu
MirBase ID: MIMAT0019761
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
530-550
0.029
0
RP11-507K2.2
hsa-miR-4677-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000555444
Biotype: antisense
Gene id: ENSG00000258983
Gene Name: RP11-507K2.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4677-3p
Sequence: ucugugagaccaaagaacuacu
MirBase ID: MIMAT0019761
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
568-583
0.026
0
6mer
246-272
0.003
1
XLOC_008172
hsa-miR-4677-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: chrX
Transcript: TCONS_00017515
Biotype: transcript isomorph
Gene id: XLOC_008172
Gene Name: XLOC_008172
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-4677-3p
Sequence: ucugugagaccaaagaacuacu
MirBase ID: MIMAT0019761
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
255-277
0.029
4
RP11-712P20.2
hsa-miR-4677-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000593078
Biotype: sense_intronic
Gene id: ENSG00000266965
Gene Name: RP11-712P20.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4677-3p
Sequence: ucugugagaccaaagaacuacu
MirBase ID: MIMAT0019761
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1084-1108
0.029
1
AP000679.2
hsa-miR-4677-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000319763
Biotype: antisense
Gene id: ENSG00000176984
Gene Name: AP000679.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4677-3p
Sequence: ucugugagaccaaagaacuacu
MirBase ID: MIMAT0019761
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1629-1648
0.009
1
9mer
1122-1140
0.008
Not Conserved
8mer
528-553
0.007
1
7mer
846-859
0.005
2
CTD-2303H24.2
hsa-miR-4677-3p
0.756
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000610155
Biotype: processed_transcript
Gene id: ENSG00000273018
Gene Name: CTD-2303H24.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-4677-3p
Sequence: ucugugagaccaaagaacuacu
MirBase ID: MIMAT0019761
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
39-57
0.027
0
6mer
392-402
0.003
Not Conserved
XLOC_011217
hsa-miR-4677-3p
0.756
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023919
Biotype: transcript isomorph
Gene id: XLOC_011217
Gene Name: XLOC_011217
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-4677-3p
Sequence: ucugugagaccaaagaacuacu
MirBase ID: MIMAT0019761
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
206-225
0.017
1
6mer
670-687
0.005
6
6mer
1809-1814
0.004
0
6mer
1373-1387
0.003
1
CTB-92J24.2
hsa-miR-4677-3p
0.756
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000594230
Biotype: sense_intronic
Gene id: ENSG00000269397
Gene Name: CTB-92J24.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-4677-3p
Sequence: ucugugagaccaaagaacuacu
MirBase ID: MIMAT0019761
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1066-1087
0.029
0
AC004510.3
hsa-miR-4677-3p
0.755
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000589310
Biotype: lincRNA
Gene id: ENSG00000267308
Gene Name: AC004510.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4677-3p
Sequence: ucugugagaccaaagaacuacu
MirBase ID: MIMAT0019761
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
383-390
0.017
1
7mer
353-373
0.012
0
RP11-111E14.1
hsa-miR-4677-3p
0.755
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000558050
Biotype: antisense
Gene id: ENSG00000259351
Gene Name: RP11-111E14.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4677-3p
Sequence: ucugugagaccaaagaacuacu
MirBase ID: MIMAT0019761
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
238-257
0.018
7
7mer
1014-1036
0.012
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept