LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-455-3p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
LINC00493
hsa-miR-455-3p
0.746
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: NR_015432.1
Biotype: sense
Gene id: NR_015432.1 (gene)
Gene Name: LINC00493
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
306-314
0.028
4
RP11-47L3.1
hsa-miR-455-3p
0.746
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000591886
Biotype: lincRNA
Gene id: ENSG00000267364
Gene Name: RP11-47L3.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer+wobble
90-113
0.028
0
AC073043.1
hsa-miR-455-3p
0.746
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000454153
Biotype: lincRNA
Gene id: ENSG00000232732
Gene Name: AC073043.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
84-103
0.028
1
XLOC_002168
hsa-miR-455-3p
0.745
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004313
Biotype: transcript isomorph
Gene id: XLOC_002168
Gene Name: XLOC_002168
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
296-313
0.028
5
RP4-678D15.1
hsa-miR-455-3p
0.743
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000606932
Biotype: antisense
Gene id: ENSG00000271774
Gene Name: RP4-678D15.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
13-25
0.028
9
RP11-231I13.2
hsa-miR-455-3p
0.742
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000567252
Biotype: antisense
Gene id: ENSG00000242120
Gene Name: RP11-231I13.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
112-125
0.028
4
RP4-781K5.5
hsa-miR-455-3p
0.742
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000441360
Biotype: lincRNA
Gene id: ENSG00000241475
Gene Name: RP4-781K5.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
573-587
0.028
1
AF131215.4
hsa-miR-455-3p
0.742
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000531549
Biotype: sense_intronic
Gene id: ENSG00000254556
Gene Name: AF131215.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
270-283
0.025
1
6mer
546-570
0.003
0
SOX2-OT
hsa-miR-455-3p
0.742
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000594942
Biotype: sense_overlapping
Gene id: ENSG00000242808
Gene Name: SOX2-OT
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
45-71
0.025
0
6mer
124-132
0.003
1
MKX-AS1
hsa-miR-455-3p
0.742
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000419777
Biotype: antisense
Gene id: ENSG00000230500
Gene Name: MKX-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
352-372
0.022
0
7mer
123-144
0.003
0
6mer
234-244
0.002
1
AC010894.5
hsa-miR-455-3p
0.742
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000454203
Biotype: antisense
Gene id: ENSG00000237798
Gene Name: AC010894.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
191-212
0.028
1
LINC00502
hsa-miR-455-3p
0.741
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: NR_047467.2
Biotype: lincRNA
Gene id: NR_047467.2 (gene)
Gene Name: LINC00502
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
25-46
0.017
1
6mer
117-127
0.011
5
FLJ21408
hsa-miR-455-3p
0.741
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000565060
Biotype: antisense
Gene id: ENSG00000245888
Gene Name: FLJ21408
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
341-358
0.028
0
AP000302.58
hsa-miR-455-3p
0.741
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000450928
Biotype: antisense
Gene id: ENSG00000231355
Gene Name: AP000302.58
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Kidney Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
265-280
0.028
1
XLOC_002746
hsa-miR-455-3p
0.740
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006143
Biotype: transcript isomorph
Gene id: XLOC_002746
Gene Name: XLOC_002746
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
6768-6777
0.018
2
6mer
7373-7388
0.004
5
6mer
230-252
0.003
Not Conserved
6mer
7143-7154
0.002
1
6mer
1968-1993
0.001
Not Conserved
XLOC_006771
hsa-miR-455-3p
0.740
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014672
Biotype: transcript isomorph
Gene id: XLOC_006771
Gene Name: XLOC_006771
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
859-870
0.028
1
XLOC_005201
hsa-miR-455-3p
0.740
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012436
Biotype: transcript isomorph
Gene id: XLOC_005201
Gene Name: XLOC_005201
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
51-65
0.023
1
6mer
80-84
0.004
0
DYNLL1-AS1
hsa-miR-455-3p
0.739
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: NR_038854.1
Biotype: antisense
Gene id: NR_038854.1 (gene)
Gene Name: DYNLL1-AS1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
267-290
0.025
2
6mer
975-984
0.002
2
DYNLL1-AS1
hsa-miR-455-3p
0.739
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000500741
Biotype: antisense
Gene id: ENSG00000248008
Gene Name: DYNLL1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
277-300
0.025
2
6mer
985-994
0.003
2
CTA-544A11.1
hsa-miR-455-3p
0.737
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624411
Biotype: antisense
Gene id: ENSG00000279802
Gene Name: CTA-544A11.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
10785-10803
0.019
1
6mer
38-59
0.004
2
6mer
672-694
0.004
2
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept