LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-375


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
CTD-2383I20.1
hsa-miR-375
0.740
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000506305
Biotype: lincRNA
Gene id: ENSG00000249994
Gene Name: CTD-2383I20.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
471-490
0.021
1
6mer
281-298
0.007
1
AC159540.1
hsa-miR-375
0.740
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000618277
Biotype: lincRNA
Gene id: ENSG00000230606
Gene Name: AC159540.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
313-336
0.028
1
RP11-299H22.6
hsa-miR-375
0.740
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000568092
Biotype: lincRNA
Gene id: ENSG00000261296
Gene Name: RP11-299H22.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2358-2377
0.012
1
7mer
1840-1863
0.009
0
6mer
2720-2741
0.007
1
FGD5-AS1
hsa-miR-375
0.739
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000426200
Biotype: antisense
Gene id: ENSG00000225733
Gene Name: FGD5-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1656-1680
0.021
4
6mer
1326-1350
0.003
1
6mer
507-527
0.003
0
XLOC_005664
hsa-miR-375
0.739
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012134
Biotype: transcript isomorph
Gene id: XLOC_005664
Gene Name: XLOC_005664
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
92-110
0.028
0
CTD-2587M2.1
hsa-miR-375
0.739
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000512693
Biotype: lincRNA
Gene id: ENSG00000249476
Gene Name: CTD-2587M2.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
5431-5453
0.007
1
6mer
5329-5346
0.006
2
6mer
2272-2283
0.004
5
6mer
245-268
0.003
0
6mer
3195-3219
0.003
3
6mer
963-987
0.003
0
6mer
3444-3469
0.002
1
6mer
905-930
0.001
0
GNG12-AS1
hsa-miR-375
0.739
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000413628
Biotype: antisense
Gene id: ENSG00000232284
Gene Name: GNG12-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
163-178
0.018
2
6mer
341-354
0.004
2
6mer
1930-1955
0.003
Not Conserved
6mer
90-109
0.003
1
RP11-392P7.6
hsa-miR-375
0.739
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000540198
Biotype: antisense
Gene id: ENSG00000247498
Gene Name: RP11-392P7.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
127-137
0.022
3
6mer
354-377
0.005
2
LOC100131825
hsa-miR-375
0.739
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_037870.1
Biotype: antisense
Gene id: NR_037870.1 (gene)
Gene Name: LOC100131825
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
35-55
0.019
2
6mer
3131-3155
0.005
1
6mer
260-283
0.003
0
RP11-179A16.1
hsa-miR-375
0.739
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000532217
Biotype: lincRNA
Gene id: ENSG00000245832
Gene Name: RP11-179A16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
173-191
0.028
4
RP11-121G22.3
hsa-miR-375
0.738
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000553197
Biotype: lincRNA
Gene id: ENSG00000257467
Gene Name: RP11-121G22.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
383-404
0.012
1
7mer
593-611
0.011
2
6mer
205-227
0.004
1
XLOC_011529
hsa-miR-375
0.738
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023739
Biotype: transcript isomorph
Gene id: XLOC_011529
Gene Name: XLOC_011529
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
85-89
0.010
2
6mer
77-81
0.010
2
6mer
97-122
0.008
0
LINC00324
hsa-miR-375
0.738
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000315707
Biotype: lincRNA
Gene id: ENSG00000178977
Gene Name: LINC00324
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2023-2046
0.021
2
6mer
585-610
0.004
0
6mer
223-241
0.003
Not Conserved
RP11-829H16.3
hsa-miR-375
0.738
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000555108
Biotype: antisense
Gene id: ENSG00000258525
Gene Name: RP11-829H16.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1657-1682
0.011
0
6mer
473-488
0.007
8
6mer
737-759
0.006
8
6mer
153-169
0.004
0
STAM-AS1
hsa-miR-375
0.738
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000563601
Biotype: antisense
Gene id: ENSG00000260589
Gene Name: STAM-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2006-2027
0.012
2
6mer
14-18
0.009
3
7mer
1357-1364
0.007
2
RP1-266L20.9
hsa-miR-375
0.737
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000586101
Biotype: sense_intronic
Gene id: ENSG00000266896
Gene Name: RP1-266L20.9
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1593-1619
0.022
0
6mer
1109-1120
0.006
1
RP11-728E14.3
hsa-miR-375
0.737
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000577309
Biotype: lincRNA
Gene id: ENSG00000265043
Gene Name: RP11-728E14.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
3589-3615
0.021
1
6mer
2435-2460
0.007
1
RP11-478H13.1
hsa-miR-375
0.737
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000456082
Biotype: lincRNA
Gene id: ENSG00000236716
Gene Name: RP11-478H13.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
283-306
0.028
2
RP11-44F14.8
hsa-miR-375
0.737
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000571340
Biotype: lincRNA
Gene id: ENSG00000262714
Gene Name: RP11-44F14.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
240-252
0.015
1
6mer
318-339
0.012
1
XLOC_002123
hsa-miR-375
0.737
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00002666
Biotype: transcript isomorph
Gene id: XLOC_002123
Gene Name: XLOC_002123
UCSC graphic: -
Expression:
  Cell Line Tissue Category
Fibroblasts Lung Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
566-590
0.018
5
6mer
341-356
0.007
5
6mer
1113-1136
0.003
3
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept