LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-375


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
XLOC_002085
hsa-miR-375
0.782
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004244
Biotype: transcript isomorph
Gene id: XLOC_002085
Gene Name: XLOC_002085
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
9-28
0.027
1
6mer
446-471
0.004
1
XLOC_010239
hsa-miR-375
0.782
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020969
Biotype: transcript isomorph
Gene id: XLOC_010239
Gene Name: XLOC_010239
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
533-548
0.013
1
6mer
691-708
0.009
3
7mer
620-643
0.006
1
6mer
518-535
0.004
1
RP11-140I24.1
hsa-miR-375
0.782
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000554640
Biotype: lincRNA
Gene id: ENSG00000258779
Gene Name: RP11-140I24.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1864-1881
0.011
5
6mer
502-528
0.008
7
6mer
2278-2304
0.003
2
6mer
744-763
0.003
0
6mer
1401-1420
0.003
0
6mer
1430-1434
0.002
1
6mer
1401-1427
0.001
0
PRR26
hsa-miR-375
0.781
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: NR_027152.2
Biotype: sense
Gene id: NR_027152.2 (gene)
Gene Name: PRR26
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
2735-2762
0.006
Not Conserved
6mer
2763-2767
0.006
0
6mer
2760-2772
0.006
0
6mer
2765-2777
0.006
0
6mer
2517-2540
0.004
1
6mer
1653-1678
0.002
0
6mer
1676-1694
0.001
0
ERC2-IT1
hsa-miR-375
0.781
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: NR_024615.1
Biotype: sense
Gene id: NR_024615.1 (gene)
Gene Name: ERC2-IT1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1912-1930
0.026
5
6mer
1894-1914
0.006
6
TPTEP1
hsa-miR-375
0.781
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000415121
Biotype: lincRNA
Gene id: ENSG00000100181
Gene Name: TPTEP1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
938-942
0.016
1
6mer
947-961
0.015
1
XLOC_005425
hsa-miR-375
0.781
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011917
Biotype: transcript isomorph
Gene id: XLOC_005425
Gene Name: XLOC_005425
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
17-39
0.031
0
CTA-373H7.7
hsa-miR-375
0.780
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000382641
Biotype: lincRNA
Gene id: ENSG00000206028
Gene Name: CTA-373H7.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1983-2001
0.031
1
XLOC_010143
hsa-miR-375
0.780
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020860
Biotype: transcript isomorph
Gene id: XLOC_010143
Gene Name: XLOC_010143
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
481-501
0.019
1
6mer
24-51
0.006
1
6mer
127-139
0.006
3
RP11-203B9.4
hsa-miR-375
0.780
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000589312
Biotype: antisense
Gene id: ENSG00000226803
Gene Name: RP11-203B9.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
482-503
0.031
3
XLOC_002401
hsa-miR-375
0.780
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004502
Biotype: transcript isomorph
Gene id: XLOC_002401
Gene Name: XLOC_002401
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
191-210
0.031
0
RP11-454P21.1
hsa-miR-375
0.780
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000510648
Biotype: lincRNA
Gene id: ENSG00000249937
Gene Name: RP11-454P21.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
408-433
0.027
0
6mer
395-421
0.004
0
RP1-225E12.2
hsa-miR-375
0.780
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000585447
Biotype: antisense
Gene id: ENSG00000231329
Gene Name: RP1-225E12.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
647-670
0.013
1
6mer
30-56
0.012
4
6mer
488-507
0.006
2
AC062029.1
hsa-miR-375
0.780
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000606164
Biotype: antisense
Gene id: ENSG00000234028
Gene Name: AC062029.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2454-2474
0.010
0
7mer
2629-2654
0.008
1
6mer
3020-3039
0.004
1
6mer
736-754
0.003
1
7mer
1275-1290
0.002
1
6mer
2134-2158
0.002
1
6mer
1245-1263
0.002
0
XLOC_008046
hsa-miR-375
0.779
mTTBlnEmP

Gene Details
Chromosome: chrX
Transcript: TCONS_00016921
Biotype: transcript isomorph
Gene id: XLOC_008046
Gene Name: XLOC_008046
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Colon Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
4411-4434
0.008
6
6mer
182-198
0.007
4
6mer
3942-3955
0.004
1
6mer
397-417
0.003
3
6mer
1921-1945
0.002
5
6mer
2299-2308
0.002
3
6mer
2972-2999
0.002
1
6mer
1658-1676
0.002
1
6mer
2606-2621
0.002
1
PRR26
hsa-miR-375
0.779
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: NR_027151.1
Biotype: sense
Gene id: NR_027151.1 (gene)
Gene Name: PRR26
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1897-1923
0.018
Not Conserved
8mer+wobble
678-696
0.010
0
6mer
649-671
0.004
1
LINC00890
hsa-miR-375
0.779
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000569275
Biotype: lincRNA
Gene id: ENSG00000260802
Gene Name: LINC00890
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
4411-4434
0.008
6
6mer
182-198
0.007
4
6mer
3942-3955
0.004
1
6mer
397-417
0.003
3
6mer
1921-1945
0.002
5
6mer
2299-2308
0.002
3
6mer
2972-2999
0.002
1
6mer
1658-1676
0.002
1
6mer
2606-2621
0.002
1
AC006273.4
hsa-miR-375
0.779
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000606966
Biotype: lincRNA
Gene id: ENSG00000272473
Gene Name: AC006273.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
25-46
0.031
0
XLOC_010247
hsa-miR-375
0.779
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020226
Biotype: transcript isomorph
Gene id: XLOC_010247
Gene Name: XLOC_010247
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
- Colon Normal/Primary
- Liver Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
58-75
0.019
0
7mer
903-923
0.013
1
CTD-2587H24.10
hsa-miR-375
0.779
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000585911
Biotype: lincRNA
Gene id: ENSG00000267649
Gene Name: CTD-2587H24.10
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
538-553
0.031
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept