LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-375


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Gene
miRNA
Score
DIANA Links
AC007750.5
hsa-miR-375
0.790
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000418968
Biotype: antisense
Gene id: ENSG00000236841
Gene Name: AC007750.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3307-3327
0.010
2
6mer
3656-3675
0.006
1
6mer
3752-3768
0.005
4
6mer
2951-2974
0.003
1
6mer
2748-2772
0.003
1
6mer
1723-1735
0.003
1
6mer
1348-1374
0.002
4
6mer
2282-2306
0.001
1
LINC00662
hsa-miR-375
0.790
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000586248
Biotype: lincRNA
Gene id: ENSG00000261824
Gene Name: LINC00662
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
212-239
0.026
0
6mer
403-429
0.006
0
FLG-AS1
hsa-miR-375
0.789
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000382265
Biotype: antisense
Gene id: ENSG00000237975
Gene Name: FLG-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
62-87
0.027
1
6mer
1683-1706
0.004
0
6mer
790-812
0.002
Not Conserved
CISTR
hsa-miR-375
0.789
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000570015
Biotype: lincRNA
Gene id: ENSG00000260492
Gene Name: CISTR
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
258-280
0.032
5
EXTL3-AS1
hsa-miR-375
0.789
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000501224
Biotype: antisense
Gene id: ENSG00000246339
Gene Name: EXTL3-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
159-185
0.008
0
6mer
3400-3426
0.007
4
6mer
746-764
0.005
4
6mer
2749-2776
0.005
7
6mer
267-291
0.005
1
6mer
2588-2607
0.002
1
RP11-638I2.4
hsa-miR-375
0.789
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000554537
Biotype: antisense
Gene id: ENSG00000258982
Gene Name: RP11-638I2.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
23-46
0.030
0
6mer
149-171
0.002
Not Conserved
XLOC_011750
hsa-miR-375
0.788
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024433
Biotype: transcript isomorph
Gene id: XLOC_011750
Gene Name: XLOC_011750
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
480-498
0.021
4
6mer
650-663
0.011
5
ZRANB2-AS2
hsa-miR-375
0.788
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000583678
Biotype: lincRNA
Gene id: ENSG00000229956
Gene Name: ZRANB2-AS2
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
440-456
0.032
0
SMIM2-AS1
hsa-miR-375
0.788
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000618753
Biotype: antisense
Gene id: ENSG00000227258
Gene Name: SMIM2-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1993-2016
0.015
1
7mer
1857-1875
0.010
0
6mer
1844-1867
0.004
1
6mer
916-933
0.002
0
AC013271.3
hsa-miR-375
0.788
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000424535
Biotype: lincRNA
Gene id: ENSG00000186148
Gene Name: AC013271.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
630-647
0.016
0
6mer
72-84
0.006
0
6mer
53-79
0.006
0
6mer
45-66
0.004
0
XLOC_012387
hsa-miR-375
0.788
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025558
Biotype: transcript isomorph
Gene id: XLOC_012387
Gene Name: XLOC_012387
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
384-398
0.032
6
CTB-158E9.1
hsa-miR-375
0.788
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000518984
Biotype: lincRNA
Gene id: ENSG00000254293
Gene Name: CTB-158E9.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
371-384
0.020
1
6mer
1441-1458
0.005
1
6mer
1360-1373
0.004
Not Conserved
6mer
1355-1373
0.003
Not Conserved
AP000477.3
hsa-miR-375
0.787
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000434859
Biotype: lincRNA
Gene id: ENSG00000226996
Gene Name: AP000477.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
589-608
0.005
0
6mer
13-28
0.005
1
6mer
330-349
0.005
1
6mer
611-623
0.004
0
6mer
611-633
0.004
0
6mer
611-628
0.004
0
6mer
589-613
0.003
Not Conserved
LINC01331
hsa-miR-375
0.787
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000507781
Biotype: lincRNA
Gene id: ENSG00000248673
Gene Name: LINC01331
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
410-429
0.027
5
6mer
218-245
0.005
1
CTD-2061E19.6
hsa-miR-375
0.787
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000484429
Biotype: antisense
Gene id: ENSG00000241059
Gene Name: CTD-2061E19.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
419-436
0.032
3
RP11-805F19.2
hsa-miR-375
0.787
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000583946
Biotype: lincRNA
Gene id: ENSG00000263635
Gene Name: RP11-805F19.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
320-337
0.032
0
RP11-506B6.6
hsa-miR-375
0.787
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000590804
Biotype: antisense
Gene id: ENSG00000226440
Gene Name: RP11-506B6.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
461-481
0.018
1
7mer
202-221
0.014
0
LINC00504
hsa-miR-375
0.786
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000505089
Biotype: lincRNA
Gene id: ENSG00000248360
Gene Name: LINC00504
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
310-333
0.013
8
7mer
3927-3952
0.003
0
7mer
2172-2194
0.003
0
6mer
4006-4020
0.003
0
6mer
1001-1028
0.002
0
6mer
779-798
0.002
0
6mer
1757-1777
0.002
0
6mer
1598-1610
0.002
Not Conserved
6mer
938-954
0.001
Not Conserved
6mer
1579-1600
0.001
0
SNHG23
hsa-miR-375
0.786
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000556637
Biotype: lincRNA
Gene id: ENSG00000225746
Gene Name: SNHG23
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
73-98
0.027
0
6mer
157-169
0.005
1
RP11-815J21.3
hsa-miR-375
0.786
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000560712
Biotype: antisense
Gene id: ENSG00000259276
Gene Name: RP11-815J21.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
412-438
0.018
5
6mer
104-122
0.010
4
6mer
517-534
0.004
1
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