LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-375


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Gene
miRNA
Score
DIANA Links
XLOC_013812
hsa-miR-375
0.795
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028452
Biotype: transcript isomorph
Gene id: XLOC_013812
Gene Name: XLOC_013812
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1280-1295
0.015
3
7mer
1226-1246
0.015
1
6mer
917-934
0.003
1
MBNL1-AS1
hsa-miR-375
0.794
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000608395
Biotype: antisense
Gene id: ENSG00000229619
Gene Name: MBNL1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
HeLa Cervix Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
557-561
0.008
7
7mer
1282-1303
0.007
2
7mer
5061-5081
0.007
3
6mer
14-35
0.006
1
6mer
1547-1564
0.002
1
6mer
3428-3440
0.002
0
XLOC_007354
hsa-miR-375
0.794
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00015980
Biotype: transcript isomorph
Gene id: XLOC_007354
Gene Name: XLOC_007354
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Heart Normal/Primary
- Lung Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
119-135
0.024
0
7mer
472-489
0.008
1
WT1-AS
hsa-miR-375
0.794
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000525436
Biotype: antisense
Gene id: ENSG00000183242
Gene Name: WT1-AS
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
352-371
0.023
7
6mer
328-347
0.010
9
RP11-454P21.1
hsa-miR-375
0.793
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000511596
Biotype: lincRNA
Gene id: ENSG00000249937
Gene Name: RP11-454P21.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
507-532
0.028
0
6mer
494-520
0.004
0
RP11-195O1.5
hsa-miR-375
0.793
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000572165
Biotype: processed_transcript
Gene id: ENSG00000279242
Gene Name: RP11-195O1.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
80-101
0.028
6
6mer
223-244
0.005
0
RP11-343L5.2
hsa-miR-375
0.793
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000607625
Biotype: lincRNA
Gene id: ENSG00000271862
Gene Name: RP11-343L5.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
993-1016
0.013
1
7mer
1525-1549
0.012
1
6mer
308-334
0.008
5
TRAF3IP2-AS1
hsa-miR-375
0.793
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000531702
Biotype: antisense
Gene id: ENSG00000255389
Gene Name: TRAF3IP2-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2103-2120
0.015
0
6mer
2401-2413
0.013
6
6mer
409-436
0.004
0
XLOC_005508
hsa-miR-375
0.792
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011994
Biotype: transcript isomorph
Gene id: XLOC_005508
Gene Name: XLOC_005508
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
15-40
0.033
2
RP11-527H14.1
hsa-miR-375
0.792
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000583306
Biotype: lincRNA
Gene id: ENSG00000263821
Gene Name: RP11-527H14.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
266-291
0.016
0
6mer
141-166
0.009
1
6mer
97-116
0.007
0
AC097467.2
hsa-miR-375
0.792
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000597939
Biotype: antisense
Gene id: ENSG00000250910
Gene Name: AC097467.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
639-658
0.017
1
7mer
301-309
0.011
1
6mer
463-484
0.004
1
LINC01449
hsa-miR-375
0.792
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000440213
Biotype: lincRNA
Gene id: ENSG00000224017
Gene Name: LINC01449
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
44-64
0.029
3
6mer
655-671
0.003
1
CTB-113D17.1
hsa-miR-375
0.792
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000609389
Biotype: antisense
Gene id: ENSG00000272568
Gene Name: CTB-113D17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
531-538
0.018
2
7mer
2799-2818
0.009
5
6mer
2737-2757
0.003
0
6mer
1347-1366
0.002
0
AC018737.3
hsa-miR-375
0.791
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000438722
Biotype: lincRNA
Gene id: ENSG00000224655
Gene Name: AC018737.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
76-101
0.032
4
RP11-23D5.1
hsa-miR-375
0.791
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000437471
Biotype: lincRNA
Gene id: ENSG00000230365
Gene Name: RP11-23D5.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
94-121
0.023
1
6mer
225-242
0.009
2
AL121578.2
hsa-miR-375
0.790
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000567273
Biotype: lincRNA
Gene id: ENSG00000259977
Gene Name: AL121578.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
593-617
0.021
1
6mer
407-429
0.006
4
6mer
159-182
0.005
1
RP4-781K5.6
hsa-miR-375
0.790
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000442382
Biotype: lincRNA
Gene id: ENSG00000230628
Gene Name: RP4-781K5.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Liver Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
307-331
0.016
1
6mer
3278-3286
0.006
3
6mer
1903-1923
0.004
5
6mer
3094-3107
0.003
1
6mer
1418-1441
0.002
1
6mer
1881-1891
0.001
2
XLOC_008172
hsa-miR-375
0.790
mTTBlnEmP

Gene Details
Chromosome: chrX
Transcript: TCONS_00017515
Biotype: transcript isomorph
Gene id: XLOC_008172
Gene Name: XLOC_008172
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
362-375
0.032
4
XLOC_003503
hsa-miR-375
0.790
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00007384
Biotype: transcript isomorph
Gene id: XLOC_003503
Gene Name: XLOC_003503
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
67-87
0.012
7
7mer
339-361
0.010
1
6mer
1806-1832
0.006
1
6mer
547-571
0.004
1
LINC00243
hsa-miR-375
0.790
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000399196
Biotype: lincRNA
Gene id: ENSG00000214894
Gene Name: LINC00243
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1713-1736
0.018
Not Conserved
6mer
376-400
0.008
4
6mer
1644-1656
0.004
1
6mer
1696-1720
0.002
Not Conserved
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