LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-375


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
TRAM2-AS1
hsa-miR-375
0.850
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000606714
Biotype: lincRNA
Gene id: ENSG00000225791
Gene Name: TRAM2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
687-711
0.022
0
7mer
1619-1645
0.010
2
6mer
336-357
0.004
0
7mer
1160-1183
0.002
Not Conserved
RP11-831A10.2
hsa-miR-375
0.850
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000526934
Biotype: lincRNA
Gene id: ENSG00000254863
Gene Name: RP11-831A10.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
192-209
0.039
10
XLOC_002245
hsa-miR-375
0.849
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004366
Biotype: transcript isomorph
Gene id: XLOC_002245
Gene Name: XLOC_002245
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
121-139
0.026
3
7mer
301-327
0.013
3
XLOC_006839
hsa-miR-375
0.849
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014755
Biotype: transcript isomorph
Gene id: XLOC_006839
Gene Name: XLOC_006839
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
Fibroblasts Lung Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
501-521
0.012
0
6mer
2491-2516
0.007
2
6mer
2527-2544
0.005
0
6mer
2149-2162
0.005
1
6mer
2428-2451
0.004
0
6mer
1883-1910
0.003
0
6mer
1752-1769
0.002
Not Conserved
ZNRD1-AS1
hsa-miR-375
0.849
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000452229
Biotype: antisense
Gene id: ENSG00000204623
Gene Name: ZNRD1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
652-679
0.013
2
7mer
1304-1327
0.009
3
7mer
480-504
0.006
0
7mer
2562-2584
0.005
0
6mer
3535-3560
0.004
2
6mer
2531-2552
0.002
1
RP11-236J17.6
hsa-miR-375
0.849
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000528151
Biotype: antisense
Gene id: ENSG00000254921
Gene Name: RP11-236J17.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
346-373
0.039
8
ALMS1-IT1
hsa-miR-375
0.849
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_046762.1
Biotype: sense
Gene id: NR_046762.1 (gene)
Gene Name: ALMS1-IT1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
723-747
0.020
1
6mer
47-68
0.012
1
6mer
45-59
0.007
0
RP11-398J10.2
hsa-miR-375
0.848
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000554412
Biotype: lincRNA
Gene id: ENSG00000258489
Gene Name: RP11-398J10.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
109-128
0.028
0
6mer
255-278
0.006
3
6mer
455-479
0.005
1
XLOC_000199
hsa-miR-375
0.847
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000200
Biotype: transcript isomorph
Gene id: XLOC_000199
Gene Name: XLOC_000199
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Liver Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
289-314
0.015
1
6mer
1789-1815
0.014
1
6mer
1146-1172
0.007
1
6mer
1161-1180
0.002
0
AC007228.9
hsa-miR-375
0.847
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000602145
Biotype: lincRNA
Gene id: ENSG00000268568
Gene Name: AC007228.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
356-375
0.011
0
6mer
81-85
0.009
1
6mer
86-112
0.008
0
6mer
436-457
0.005
0
6mer
651-658
0.005
0
RP11-707M3.3
hsa-miR-375
0.847
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000606067
Biotype: antisense
Gene id: ENSG00000272155
Gene Name: RP11-707M3.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
6-20
0.039
4
XLOC_001596
hsa-miR-375
0.846
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003801
Biotype: transcript isomorph
Gene id: XLOC_001596
Gene Name: XLOC_001596
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HepG2 Liver Cancer/Malignant
- Lymph Node Normal/Primary
- Placenta Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
703-717
0.039
5
XLOC_002258
hsa-miR-375
0.846
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004374
Biotype: transcript isomorph
Gene id: XLOC_002258
Gene Name: XLOC_002258
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Breast Normal/Primary
- Kidney Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
960-987
0.028
1
6mer
2486-2490
0.011
1
ARNTL2-AS1
hsa-miR-375
0.846
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000500498
Biotype: antisense
Gene id: ENSG00000245311
Gene Name: ARNTL2-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
383-401
0.016
0
7mer
57-74
0.013
1
7mer
580-602
0.008
1
6mer
429-452
0.002
0
XLOC_006725
hsa-miR-375
0.846
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014630
Biotype: transcript isomorph
Gene id: XLOC_006725
Gene Name: XLOC_006725
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
952-972
0.021
1
7mer
397-424
0.017
2
RP11-116D17.2
hsa-miR-375
0.846
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000546696
Biotype: lincRNA
Gene id: ENSG00000257519
Gene Name: RP11-116D17.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
484-510
0.007
0
6mer
511-515
0.007
0
6mer
508-520
0.007
0
6mer
316-326
0.007
0
6mer
513-525
0.006
Not Conserved
6mer
386-403
0.004
Not Conserved
XLOC_012200
hsa-miR-375
0.845
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025387
Biotype: transcript isomorph
Gene id: XLOC_012200
Gene Name: XLOC_012200
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
224-248
0.030
1
6mer
75-98
0.009
1
SC22CB-109E1.1
hsa-miR-375
0.845
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623290
Biotype: lincRNA
Gene id: ENSG00000279582
Gene Name: SC22CB-109E1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5450-5462
0.008
1
6mer
9953-9977
0.006
0
6mer
1726-1737
0.003
1
6mer
7819-7845
0.003
1
6mer
8670-8693
0.003
1
6mer
4164-4186
0.002
1
6mer
7978-8003
0.002
1
6mer
8823-8843
0.002
1
6mer
5756-5769
0.002
1
6mer
4826-4845
0.002
1
6mer
5903-5928
0.001
1
6mer
8011-8022
0.001
1
6mer
7832-7855
0.001
1
6mer
4924-4943
0.001
0
6mer
5922-5937
0.001
1
6mer
8080-8095
0.001
0
6mer
4855-4873
0.000
0
RP11-539I5.1
hsa-miR-375
0.845
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000453491
Biotype: antisense
Gene id: ENSG00000225302
Gene Name: RP11-539I5.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4652-4674
0.026
3
7mer
2641-2663
0.006
3
6mer
4257-4283
0.002
1
6mer
2970-2983
0.002
1
6mer
3406-3417
0.001
0
RP11-389C8.2
hsa-miR-375
0.845
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000564956
Biotype: sense_overlapping
Gene id: ENSG00000261269
Gene Name: RP11-389C8.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
227-244
0.025
7
7mer
528-545
0.011
0
6mer
1276-1288
0.002
2
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept