LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-372-3p


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Gene
miRNA
Score
DIANA Links
UXT-AS1
hsa-miR-372-3p
0.701
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000591832
Biotype: antisense
Gene id: ENSG00000267064
Gene Name: UXT-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
33-49
0.025
7
LINC00517
hsa-miR-372-3p
0.701
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000554257
Biotype: antisense
Gene id: ENSG00000259091
Gene Name: LINC00517
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
372-392
0.019
4
6mer
2054-2068
0.004
4
6mer
1880-1904
0.002
1
FLJ37505
hsa-miR-372-3p
0.701
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000614177
Biotype: lincRNA
Gene id: ENSG00000256597
Gene Name: FLJ37505
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1086-1106
0.022
Not Conserved
6mer
582-602
0.003
0
RP11-522B15.3
hsa-miR-372-3p
0.701
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000558499
Biotype: lincRNA
Gene id: ENSG00000259275
Gene Name: RP11-522B15.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4179-4202
0.008
1
8mer
2352-2376
0.005
1
6mer
3758-3771
0.004
3
7mer
3503-3524
0.003
0
6mer
1084-1099
0.002
1
6mer
2992-3015
0.002
0
6mer
3215-3235
0.001
0
XLOC_009043
hsa-miR-372-3p
0.701
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019211
Biotype: transcript isomorph
Gene id: XLOC_009043
Gene Name: XLOC_009043
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
137-160
0.025
0
AC007381.3
hsa-miR-372-3p
0.700
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000457668
Biotype: lincRNA
Gene id: ENSG00000228590
Gene Name: AC007381.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Heart Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
327-346
0.025
3
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