LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-372-3p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
XLOC_007035
hsa-miR-372-3p
0.740
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014956
Biotype: transcript isomorph
Gene id: XLOC_007035
Gene Name: XLOC_007035
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
- Lung Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3871-3895
0.006
1
8mer
10200-10224
0.004
0
7mer
6332-6359
0.004
Not Conserved
9mer
686-710
0.004
Not Conserved
8mer
11004-11022
0.003
0
6mer
6063-6082
0.003
2
9mer
9367-9391
0.002
0
9mer
6957-6981
0.002
0
6mer
6005-6024
0.000
0
RP11-755B10.3
hsa-miR-372-3p
0.740
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000465933
Biotype: lincRNA
Gene id: ENSG00000241933
Gene Name: RP11-755B10.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
958-972
0.011
1
9mer
2663-2687
0.007
0
7mer
2878-2900
0.006
0
9mer
2365-2386
0.003
0
RP4-539M6.22
hsa-miR-372-3p
0.740
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000366413
Biotype: pseudogene
Gene id: ENSG00000273428
Gene Name: RP4-539M6.22
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
163-180
0.004
0
7mer
246-264
0.004
0
6mer
434-450
0.003
0
6mer
141-158
0.003
0
6mer
331-347
0.003
1
6mer
261-284
0.003
0
6mer
289-305
0.002
0
6mer
311-326
0.002
0
6mer
412-429
0.002
0
RP11-419K12.1
hsa-miR-372-3p
0.739
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000522667
Biotype: lincRNA
Gene id: ENSG00000254223
Gene Name: RP11-419K12.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
488-505
0.028
1
XLOC_005477
hsa-miR-372-3p
0.739
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012606
Biotype: transcript isomorph
Gene id: XLOC_005477
Gene Name: XLOC_005477
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
14-39
0.019
1
9mer
135-156
0.009
1
RP11-329J18.2
hsa-miR-372-3p
0.739
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000565694
Biotype: antisense
Gene id: ENSG00000260281
Gene Name: RP11-329J18.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
154-160
0.028
3
RP11-516C1.1
hsa-miR-372-3p
0.739
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000558047
Biotype: antisense
Gene id: ENSG00000259595
Gene Name: RP11-516C1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
433-459
0.024
4
6mer
254-281
0.004
0
RP11-691G17.1
hsa-miR-372-3p
0.739
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000567488
Biotype: lincRNA
Gene id: ENSG00000261826
Gene Name: RP11-691G17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer+mismatch
137-154
0.025
1
6mer
1730-1744
0.003
0
RP11-190J23.1
hsa-miR-372-3p
0.739
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000549878
Biotype: antisense
Gene id: ENSG00000257284
Gene Name: RP11-190J23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
13-17
0.017
9
6mer
181-202
0.011
10
XLOC_002275
hsa-miR-372-3p
0.738
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004392
Biotype: transcript isomorph
Gene id: XLOC_002275
Gene Name: XLOC_002275
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
214-233
0.012
5
6mer
1258-1272
0.011
7
7mer
1368-1385
0.005
1
AC092669.6
hsa-miR-372-3p
0.738
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000412313
Biotype: lincRNA
Gene id: ENSG00000225815
Gene Name: AC092669.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
883-908
0.028
4
RP11-285M22.1
hsa-miR-372-3p
0.737
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000577879
Biotype: lincRNA
Gene id: ENSG00000265114
Gene Name: RP11-285M22.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
166-182
0.023
1
6mer
272-297
0.005
0
XLOC_004901
hsa-miR-372-3p
0.737
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00010966
Biotype: transcript isomorph
Gene id: XLOC_004901
Gene Name: XLOC_004901
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
153-167
0.015
1
6mer
33-59
0.007
1
6mer
126-145
0.006
1
LINC00905
hsa-miR-372-3p
0.737
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000589071
Biotype: retained_intron
Gene id: ENSG00000167459
Gene Name: LINC00905
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
811-834
0.028
1
RP11-340I6.8
hsa-miR-372-3p
0.736
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000450544
Biotype: lincRNA
Gene id: ENSG00000226581
Gene Name: RP11-340I6.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
245-266
0.018
0
6mer
177-201
0.009
0
NLGN1-AS1
hsa-miR-372-3p
0.736
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000423873
Biotype: antisense
Gene id: ENSG00000228213
Gene Name: NLGN1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
764-785
0.028
4
RP11-544D21.2
hsa-miR-372-3p
0.736
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000561926
Biotype: lincRNA
Gene id: ENSG00000259776
Gene Name: RP11-544D21.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2418-2436
0.019
1
9mer
957-981
0.006
1
9mer
2031-2055
0.002
0
XLOC_005514
hsa-miR-372-3p
0.736
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012001
Biotype: transcript isomorph
Gene id: XLOC_005514
Gene Name: XLOC_005514
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lymph Node Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
2400-2418
0.007
2
6mer
2371-2393
0.005
1
6mer
2068-2084
0.005
Not Conserved
9mer
1409-1433
0.004
1
6mer
866-889
0.003
1
6mer
1173-1199
0.002
0
7mer
1196-1212
0.001
1
C3orf49
hsa-miR-372-3p
0.736
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: NR_026866.1
Biotype: sense
Gene id: NR_026866.1 (gene)
Gene Name: C3orf49
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
704-718
0.027
3
LINC01135
hsa-miR-372-3p
0.735
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_034015.1
Biotype: lincRNA
Gene id: NR_034015.1 (gene)
Gene Name: LINC01135
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
759-776
0.027
4
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept