LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-363-3p


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Gene
miRNA
Score
DIANA Links
XLOC_010799
hsa-miR-363-3p
0.816
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022470
Biotype: transcript isomorph
Gene id: XLOC_010799
Gene Name: XLOC_010799
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
282-295
0.018
11
7mer
80-97
0.017
5
XLOC_010106
hsa-miR-363-3p
0.816
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020820
Biotype: transcript isomorph
Gene id: XLOC_010106
Gene Name: XLOC_010106
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2475-2501
0.027
1
6mer
101-110
0.008
2
RP11-151E14.1
hsa-miR-363-3p
0.815
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000569070
Biotype: lincRNA
Gene id: ENSG00000261035
Gene Name: RP11-151E14.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
187-194
0.019
1
7mer
328-353
0.016
1
LINC00461
hsa-miR-363-3p
0.815
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000511014
Biotype: lincRNA
Gene id: ENSG00000245526
Gene Name: LINC00461
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3037-3056
0.017
8
7mer
662-683
0.009
1
6mer
2843-2868
0.006
9
6mer
1146-1166
0.003
1
RP11-900F13.2
hsa-miR-363-3p
0.814
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000612250
Biotype: lincRNA
Gene id: ENSG00000278011
Gene Name: RP11-900F13.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
81-93
0.035
1
RP11-544D21.2
hsa-miR-363-3p
0.813
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000561926
Biotype: lincRNA
Gene id: ENSG00000259776
Gene Name: RP11-544D21.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2819-2838
0.030
1
6mer
1475-1492
0.004
2
6mer
1416-1443
0.001
1
XLOC_003973
hsa-miR-363-3p
0.813
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008501
Biotype: transcript isomorph
Gene id: XLOC_003973
Gene Name: XLOC_003973
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
330-344
0.022
0
6mer
352-374
0.012
0
XLOC_000610
hsa-miR-363-3p
0.813
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000416
Biotype: transcript isomorph
Gene id: XLOC_000610
Gene Name: XLOC_000610
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5-31
0.018
1
6mer
1939-1948
0.011
2
7mer
1070-1084
0.005
1
RP11-244H18.3
hsa-miR-363-3p
0.812
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000611741
Biotype: lincRNA
Gene id: ENSG00000273558
Gene Name: RP11-244H18.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1593-1602
0.027
0
6mer
1798-1818
0.008
0
BHLHE40-AS1
hsa-miR-363-3p
0.812
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000620618
Biotype: antisense
Gene id: ENSG00000235831
Gene Name: BHLHE40-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
63-80
0.022
0
8mer
1664-1681
0.007
1
6mer
1833-1851
0.003
3
6mer
1111-1132
0.003
1
RP11-403N16.3
hsa-miR-363-3p
0.811
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000565707
Biotype: lincRNA
Gene id: ENSG00000260564
Gene Name: RP11-403N16.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2208-2224
0.014
11
8mer
1266-1286
0.011
1
7mer
821-839
0.007
0
7mer
841-860
0.003
1
CTA-212A2.3
hsa-miR-363-3p
0.811
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624264
Biotype: lincRNA
Gene id: ENSG00000279217
Gene Name: CTA-212A2.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
42-54
0.007
1
7mer
13178-13200
0.004
0
6mer
13438-13453
0.003
0
7mer
9688-9702
0.002
1
6mer
9298-9313
0.002
1
7mer
11116-11130
0.002
0
6mer
5874-5887
0.002
1
7mer
11428-11442
0.002
1
6mer
4510-4530
0.002
1
6mer
10550-10563
0.002
1
6mer
1028-1046
0.002
0
7mer
2743-2769
0.002
0
6mer
4788-4810
0.001
1
6mer
3367-3390
0.001
Not Conserved
LINC01021
hsa-miR-363-3p
0.811
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000503107
Biotype: lincRNA
Gene id: ENSG00000250337
Gene Name: LINC01021
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
415-436
0.028
2
7mer
197-221
0.006
0
LINC01347
hsa-miR-363-3p
0.811
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000438255
Biotype: lincRNA
Gene id: ENSG00000214837
Gene Name: LINC01347
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
69-90
0.035
1
RP13-216E22.4
hsa-miR-363-3p
0.811
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000444482
Biotype: lincRNA
Gene id: ENSG00000228906
Gene Name: RP13-216E22.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
40-54
0.035
1
XLOC_009200
hsa-miR-363-3p
0.808
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019375
Biotype: transcript isomorph
Gene id: XLOC_009200
Gene Name: XLOC_009200
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Kidney Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
294-310
0.015
1
7mer
1070-1081
0.011
0
7mer
311-328
0.008
1
SLC8A1-AS1
hsa-miR-363-3p
0.808
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000427354
Biotype: antisense
Gene id: ENSG00000227028
Gene Name: SLC8A1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
554-575
0.028
3
6mer
584-607
0.006
3
RP11-804F13.1
hsa-miR-363-3p
0.808
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000549364
Biotype: lincRNA
Gene id: ENSG00000258119
Gene Name: RP11-804F13.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
81-94
0.028
3
6mer
175-188
0.006
3
CTD-2571L23.8
hsa-miR-363-3p
0.808
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000599924
Biotype: lincRNA
Gene id: ENSG00000268746
Gene Name: CTD-2571L23.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
186-198
0.034
0
RP5-1007H16.1
hsa-miR-363-3p
0.807
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000609858
Biotype: lincRNA
Gene id: ENSG00000272745
Gene Name: RP5-1007H16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
542-567
0.034
1
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