LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-363-3p


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Gene
miRNA
Score
DIANA Links
LOC101926960
hsa-miR-363-3p
0.735
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: NR_104636.1
Biotype: lincRNA
Gene id: NR_104636.1 (gene)
Gene Name: LOC101926960
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1574-1598
0.011
2
6mer
263-279
0.006
0
6mer
1614-1633
0.005
1
6mer
781-805
0.004
1
6mer
1807-1832
0.002
0
RP1-46F2.3
hsa-miR-363-3p
0.735
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000546852
Biotype: lincRNA
Gene id: ENSG00000258240
Gene Name: RP1-46F2.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
538-550
0.012
0
7mer
219-241
0.010
0
7mer
227-241
0.006
0
RP11-277P12.20
hsa-miR-363-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000500682
Biotype: antisense
Gene id: ENSG00000245648
Gene Name: RP11-277P12.20
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2015-2028
0.008
0
7mer
2777-2800
0.006
0
6mer
2251-2255
0.006
1
6mer
2282-2291
0.002
0
6mer
1310-1325
0.002
0
6mer
1584-1606
0.002
1
6mer
1366-1386
0.001
1
SC22CB-109E1.1
hsa-miR-363-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623290
Biotype: lincRNA
Gene id: ENSG00000279582
Gene Name: SC22CB-109E1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
8995-9011
0.006
1
6mer
3293-3313
0.004
3
6mer
2993-3014
0.004
3
6mer
5614-5636
0.002
1
6mer
1405-1421
0.002
1
6mer
7812-7831
0.002
1
6mer
5179-5202
0.002
1
6mer
5727-5751
0.001
1
6mer
3319-3323
0.001
1
LINC01140
hsa-miR-363-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000590653
Biotype: lincRNA
Gene id: ENSG00000267272
Gene Name: LINC01140
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2998-3012
0.014
6
6mer
2056-2080
0.005
8
7mer
2065-2086
0.004
10
6mer
1202-1216
0.003
3
6mer
1337-1348
0.001
0
AC087430.1
hsa-miR-363-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000451707
Biotype: lincRNA
Gene id: ENSG00000235158
Gene Name: AC087430.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1417-1436
0.013
0
7mer
3111-3119
0.008
2
6mer
2653-2663
0.005
3
6mer
1602-1618
0.001
0
XLOC_007043
hsa-miR-363-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014557
Biotype: transcript isomorph
Gene id: XLOC_007043
Gene Name: XLOC_007043
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
512-527
0.025
1
6mer
602-622
0.002
0
LINC01005
hsa-miR-363-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000441691
Biotype: antisense
Gene id: ENSG00000228564
Gene Name: LINC01005
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
26-40
0.019
1
6mer
18-40
0.008
0
RP11-204N11.1
hsa-miR-363-3p
0.732
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000555187
Biotype: lincRNA
Gene id: ENSG00000258869
Gene Name: RP11-204N11.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
90-108
0.019
6
7mer
2659-2677
0.008
1
AP001476.2
hsa-miR-363-3p
0.732
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000451618
Biotype: lincRNA
Gene id: ENSG00000224413
Gene Name: AP001476.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
127-139
0.027
0
CTD-2128A3.2
hsa-miR-363-3p
0.732
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000557547
Biotype: lincRNA
Gene id: ENSG00000258902
Gene Name: CTD-2128A3.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
466-490
0.027
5
LINC00977
hsa-miR-363-3p
0.732
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: NR_033916.1
Biotype: lincRNA
Gene id: NR_033916.1 (gene)
Gene Name: LINC00977
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1098-1109
0.027
9
XLOC_000264
hsa-miR-363-3p
0.732
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000048
Biotype: transcript isomorph
Gene id: XLOC_000264
Gene Name: XLOC_000264
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Colon Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1951-1972
0.027
0
RP11-360L9.7
hsa-miR-363-3p
0.732
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000578500
Biotype: antisense
Gene id: ENSG00000253174
Gene Name: RP11-360L9.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
832-845
0.027
1
TCL6
hsa-miR-363-3p
0.731
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000460130
Biotype: lincRNA
Gene id: ENSG00000187621
Gene Name: TCL6
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
795-812
0.017
1
6mer
24-31
0.010
0
PRKCQ-AS1
hsa-miR-363-3p
0.731
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000609627
Biotype: lincRNA
Gene id: ENSG00000237943
Gene Name: PRKCQ-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
334-346
0.027
1
XLOC_013987
hsa-miR-363-3p
0.731
mTTBlnEmP

Gene Details
Chromosome: chr21
Transcript: TCONS_00028776
Biotype: transcript isomorph
Gene id: XLOC_013987
Gene Name: XLOC_013987
UCSC graphic: -
Expression:
  Cell Line Tissue Category
Fibroblasts Foreskin Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
127-139
0.027
0
LINC01140
hsa-miR-363-3p
0.731
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000484933
Biotype: lincRNA
Gene id: ENSG00000267272
Gene Name: LINC01140
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3051-3065
0.014
6
6mer
2109-2133
0.005
8
7mer
2118-2139
0.004
10
6mer
1255-1269
0.004
3
6mer
1390-1401
0.001
0
LINC00320
hsa-miR-363-3p
0.731
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000452561
Biotype: lincRNA
Gene id: ENSG00000224924
Gene Name: LINC00320
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
386-395
0.014
6
7mer
272-284
0.013
1
RP11-292D4.1
hsa-miR-363-3p
0.730
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000512752
Biotype: lincRNA
Gene id: ENSG00000248346
Gene Name: RP11-292D4.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
477-494
0.015
1
7mer
375-388
0.012
1
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