LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-363-3p


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Gene
miRNA
Score
DIANA Links
FAM66C
hsa-miR-363-3p
0.765
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000372173
Biotype: antisense
Gene id: ENSG00000226711
Gene Name: FAM66C
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
348-362
0.030
1
RP11-594N15.2
hsa-miR-363-3p
0.765
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000522807
Biotype: lincRNA
Gene id: ENSG00000254266
Gene Name: RP11-594N15.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
22-47
0.030
0
DCTN1-AS1
hsa-miR-363-3p
0.763
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_024463.1
Biotype: antisense
Gene id: NR_024463.1 (gene)
Gene Name: DCTN1-AS1
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1963-1986
0.014
1
6mer
83-109
0.007
1
7mer
962-988
0.006
0
6mer
1712-1720
0.003
Not Conserved
RP13-36G14.4
hsa-miR-363-3p
0.762
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000603952
Biotype: sense_intronic
Gene id: ENSG00000270223
Gene Name: RP13-36G14.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
139-150
0.012
0
6mer
145-154
0.009
0
6mer
766-783
0.009
0
XLOC_006628
hsa-miR-363-3p
0.762
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00012861
Biotype: transcript isomorph
Gene id: XLOC_006628
Gene Name: XLOC_006628
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
297-320
0.019
4
6mer
567-586
0.011
7
LINC00461
hsa-miR-363-3p
0.762
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000515885
Biotype: lincRNA
Gene id: ENSG00000245526
Gene Name: LINC00461
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
529-548
0.022
8
6mer
335-360
0.008
9
XLOC_003828
hsa-miR-363-3p
0.762
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008372
Biotype: transcript isomorph
Gene id: XLOC_003828
Gene Name: XLOC_003828
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
144-164
0.030
1
AF131215.9
hsa-miR-363-3p
0.761
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000602575
Biotype: sense_intronic
Gene id: ENSG00000269918
Gene Name: AF131215.9
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
481-493
0.021
0
6mer
160-178
0.005
0
6mer
1324-1338
0.003
0
DCTN1-AS1
hsa-miR-363-3p
0.761
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000437991
Biotype: antisense
Gene id: ENSG00000237737
Gene Name: DCTN1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1963-1986
0.013
1
6mer
83-109
0.007
1
7mer
962-988
0.006
0
6mer
1712-1720
0.003
Not Conserved
XLOC_001653
hsa-miR-363-3p
0.761
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003848
Biotype: transcript isomorph
Gene id: XLOC_001653
Gene Name: XLOC_001653
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
92-104
0.030
0
RP11-81K13.1
hsa-miR-363-3p
0.761
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000547040
Biotype: antisense
Gene id: ENSG00000257434
Gene Name: RP11-81K13.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1950-1956
0.010
2
7mer
971-992
0.006
2
6mer
2122-2143
0.006
4
6mer
197-219
0.005
2
6mer
1488-1504
0.003
2
HLA-F-AS1
hsa-miR-363-3p
0.760
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000458236
Biotype: processed_transcript
Gene id: ENSG00000214922
Gene Name: HLA-F-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
946-967
0.021
1
7mer
2386-2412
0.009
0
XLOC_010769
hsa-miR-363-3p
0.760
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022430
Biotype: transcript isomorph
Gene id: XLOC_010769
Gene Name: XLOC_010769
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Colon Normal/Primary
- Liver Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
633-656
0.027
1
6mer
1881-1896
0.002
Not Conserved
LINC01446
hsa-miR-363-3p
0.759
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000380970
Biotype: lincRNA
Gene id: ENSG00000205628
Gene Name: LINC01446
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2643-2666
0.027
0
6mer
1957-1975
0.002
1
6mer
2553-2575
0.001
0
RP11-717D12.1
hsa-miR-363-3p
0.759
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000398957
Biotype: sense_intronic
Gene id: ENSG00000214773
Gene Name: RP11-717D12.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
133-148
0.029
1
XLOC_011222
hsa-miR-363-3p
0.758
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023376
Biotype: transcript isomorph
Gene id: XLOC_011222
Gene Name: XLOC_011222
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
101-123
0.029
0
CTC-458G6.2
hsa-miR-363-3p
0.758
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000507491
Biotype: lincRNA
Gene id: ENSG00000248528
Gene Name: CTC-458G6.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
27-34
0.029
2
LINC00861
hsa-miR-363-3p
0.756
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000500989
Biotype: lincRNA
Gene id: ENSG00000245164
Gene Name: LINC00861
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
5239-5264
0.012
3
7mer
2112-2117
0.005
1
7mer
466-492
0.005
0
7mer
418-429
0.004
0
6mer
1392-1408
0.003
1
RP11-190C22.8
hsa-miR-363-3p
0.756
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000609598
Biotype: lincRNA
Gene id: ENSG00000272662
Gene Name: RP11-190C22.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
389-408
0.029
2
LINC01192
hsa-miR-363-3p
0.756
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000462928
Biotype: lincRNA
Gene id: ENSG00000241369
Gene Name: LINC01192
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-363-3p
Sequence: aauugcacgguauccaucugua
MirBase ID: MIMAT0000707
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
29-56
0.018
2
8mer
509-525
0.011
0
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