LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-34b-3p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-307O13.1
hsa-miR-34b-3p
0.775
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000568811
Biotype: lincRNA
Gene id: ENSG00000261728
Gene Name: RP11-307O13.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2192-2204
0.020
1
7mer
1943-1957
0.007
1
6mer
1226-1244
0.004
2
XLOC_010962
hsa-miR-34b-3p
0.775
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022361
Biotype: transcript isomorph
Gene id: XLOC_010962
Gene Name: XLOC_010962
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
491-514
0.016
0
6mer
12-38
0.009
0
6mer
685-689
0.006
0
TTTY4C
hsa-miR-34b-3p
0.775
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000456123
Biotype: lincRNA
Gene id: ENSG00000228296
Gene Name: TTTY4C
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
854-873
0.031
0
XLOC_008332
hsa-miR-34b-3p
0.775
mTTBlnEmP

Gene Details
Chromosome: chrY
Transcript: TCONS_00017595
Biotype: transcript isomorph
Gene id: XLOC_008332
Gene Name: XLOC_008332
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
853-872
0.031
0
XLOC_008301
hsa-miR-34b-3p
0.775
mTTBlnEmP

Gene Details
Chromosome: chrY
Transcript: TCONS_00017580
Biotype: transcript isomorph
Gene id: XLOC_008301
Gene Name: XLOC_008301
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
474-493
0.031
0
RP11-510D19.1
hsa-miR-34b-3p
0.775
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000566582
Biotype: lincRNA
Gene id: ENSG00000260676
Gene Name: RP11-510D19.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
406-413
0.024
0
6mer
1212-1227
0.004
1
6mer
838-851
0.003
1
CTC-550B14.7
hsa-miR-34b-3p
0.775
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000586845
Biotype: antisense
Gene id: ENSG00000267265
Gene Name: CTC-550B14.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
115-126
0.031
1
RP1-309H15.2
hsa-miR-34b-3p
0.775
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000427775
Biotype: lincRNA
Gene id: ENSG00000228772
Gene Name: RP1-309H15.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
225-236
0.023
3
6mer
220-236
0.008
4
KCNIP4-IT1
hsa-miR-34b-3p
0.773
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: NR_002813.1
Biotype: sense
Gene id: NR_002813.1 (gene)
Gene Name: KCNIP4-IT1
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
9635-9648
0.010
2
7mer
333-351
0.006
1
7mer
4684-4689
0.004
3
6mer
4318-4322
0.003
1
7mer
8048-8064
0.003
1
7mer
5750-5768
0.002
1
6mer
5465-5480
0.002
1
6mer
3395-3421
0.001
1
RP11-35J1.1
hsa-miR-34b-3p
0.772
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000455554
Biotype: lincRNA
Gene id: ENSG00000236635
Gene Name: RP11-35J1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
156-171
0.031
1
RP4-684O24.5
hsa-miR-34b-3p
0.772
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000446562
Biotype: antisense
Gene id: ENSG00000233896
Gene Name: RP4-684O24.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1591-1596
0.017
6
6mer
1490-1517
0.009
7
6mer
1424-1439
0.004
1
CTD-2199O4.6
hsa-miR-34b-3p
0.771
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000607861
Biotype: lincRNA
Gene id: ENSG00000272417
Gene Name: CTD-2199O4.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
113-138
0.031
0
FAM182A
hsa-miR-34b-3p
0.770
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000376398
Biotype: lincRNA
Gene id: ENSG00000125804
Gene Name: FAM182A
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
179-203
0.023
0
6mer
764-771
0.003
Not Conserved
6mer
4719-4738
0.002
Not Conserved
6mer
4614-4638
0.002
0
RP11-111F5.3
hsa-miR-34b-3p
0.770
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000448491
Biotype: lincRNA
Gene id: ENSG00000231212
Gene Name: RP11-111F5.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
40-60
0.030
1
LINC01224
hsa-miR-34b-3p
0.770
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000593573
Biotype: lincRNA
Gene id: ENSG00000269416
Gene Name: LINC01224
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
19-36
0.015
1
6mer
58-80
0.015
1
RP11-299H21.1
hsa-miR-34b-3p
0.770
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000610202
Biotype: lincRNA
Gene id: ENSG00000272902
Gene Name: RP11-299H21.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2438-2461
0.024
1
6mer
1351-1376
0.003
4
6mer
1647-1657
0.003
2
RP11-482H16.1
hsa-miR-34b-3p
0.769
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000607540
Biotype: processed_transcript
Gene id: ENSG00000271894
Gene Name: RP11-482H16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
562-589
0.022
7
7mer
51-59
0.009
0
LINC01005
hsa-miR-34b-3p
0.768
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000451440
Biotype: antisense
Gene id: ENSG00000228564
Gene Name: LINC01005
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
50-67
0.016
1
7mer
196-207
0.014
0
CTD-2293H3.1
hsa-miR-34b-3p
0.767
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000588369
Biotype: sense_intronic
Gene id: ENSG00000267672
Gene Name: CTD-2293H3.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
758-763
0.013
3
7mer
660-682
0.009
3
7mer
849-861
0.008
Not Conserved
RBM5-AS1
hsa-miR-34b-3p
0.767
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: NR_045388.1
Biotype: antisense
Gene id: NR_045388.1 (gene)
Gene Name: RBM5-AS1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1252-1276
0.015
1
6mer
998-1019
0.012
15
6mer
239-266
0.003
Not Conserved
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept