LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-34b-3p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
XLOC_012515
hsa-miR-34b-3p
0.790
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025694
Biotype: transcript isomorph
Gene id: XLOC_012515
Gene Name: XLOC_012515
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
69-88
0.020
1
7mer
513-518
0.007
0
6mer
178-193
0.005
1
AC096649.2
hsa-miR-34b-3p
0.790
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000449168
Biotype: antisense
Gene id: ENSG00000229750
Gene Name: AC096649.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
467-485
0.017
9
6mer
363-382
0.011
6
6mer
272-295
0.004
4
CTD-3234P18.6
hsa-miR-34b-3p
0.790
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000611182
Biotype: lincRNA
Gene id: ENSG00000276071
Gene Name: CTD-3234P18.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
1162-1184
0.013
2
7mer
668-693
0.013
1
7mer
272-293
0.007
1
LL22NC03-2H8.5
hsa-miR-34b-3p
0.789
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000610778
Biotype: lincRNA
Gene id: ENSG00000274422
Gene Name: LL22NC03-2H8.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
256-266
0.032
0
HYMAI
hsa-miR-34b-3p
0.789
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: NR_002768.1
Biotype: sense
Gene id: NR_002768.1 (gene)
Gene Name: HYMAI
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3498-3509
0.014
5
7mer
4951-4969
0.005
0
7mer
1717-1740
0.005
3
6mer
927-945
0.004
1
6mer
382-398
0.004
1
XLOC_012004
hsa-miR-34b-3p
0.789
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00025047
Biotype: transcript isomorph
Gene id: XLOC_012004
Gene Name: XLOC_012004
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
161-174
0.027
5
6mer
859-863
0.006
7
RGPD4-AS1
hsa-miR-34b-3p
0.789
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000609972
Biotype: lincRNA
Gene id: ENSG00000230651
Gene Name: RGPD4-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
241-261
0.029
Not Conserved
6mer
322-336
0.003
Not Conserved
CTD-2139B15.4
hsa-miR-34b-3p
0.789
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000505158
Biotype: lincRNA
Gene id: ENSG00000250822
Gene Name: CTD-2139B15.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
387-399
0.026
4
6mer
356-380
0.006
3
XLOC_014019
hsa-miR-34b-3p
0.789
mTTBlnEmP

Gene Details
Chromosome: chr21
Transcript: TCONS_00029091
Biotype: transcript isomorph
Gene id: XLOC_014019
Gene Name: XLOC_014019
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
620-645
0.020
1
7mer
3790-3802
0.009
1
6mer
3674-3694
0.003
1
RP11-312J18.6
hsa-miR-34b-3p
0.788
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000427339
Biotype: lincRNA
Gene id: ENSG00000232188
Gene Name: RP11-312J18.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
127-151
0.032
0
MIR124-2HG
hsa-miR-34b-3p
0.788
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000520799
Biotype: lincRNA
Gene id: ENSG00000254377
Gene Name: MIR124-2HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
143-160
0.027
1
6mer
852-864
0.006
3
XLOC_007446
hsa-miR-34b-3p
0.787
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00016056
Biotype: transcript isomorph
Gene id: XLOC_007446
Gene Name: XLOC_007446
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
91-107
0.032
1
TMEM44-AS1
hsa-miR-34b-3p
0.787
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000453671
Biotype: antisense
Gene id: ENSG00000231770
Gene Name: TMEM44-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1095-1109
0.032
1
RP11-356J5.12
hsa-miR-34b-3p
0.787
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000419895
Biotype: lincRNA
Gene id: ENSG00000250303
Gene Name: RP11-356J5.12
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1051-1077
0.022
6
6mer
1552-1556
0.007
2
6mer
199-223
0.003
Not Conserved
RP11-160E2.16
hsa-miR-34b-3p
0.786
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000447506
Biotype: lincRNA
Gene id: ENSG00000236022
Gene Name: RP11-160E2.16
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
360-384
0.021
2
6mer
39-62
0.011
1
RP11-431M3.2
hsa-miR-34b-3p
0.786
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000518178
Biotype: lincRNA
Gene id: ENSG00000254033
Gene Name: RP11-431M3.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
308-314
0.032
1
RP11-160E2.17
hsa-miR-34b-3p
0.786
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000439868
Biotype: lincRNA
Gene id: ENSG00000230197
Gene Name: RP11-160E2.17
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
360-384
0.021
2
6mer
39-62
0.011
1
RP11-594N15.2
hsa-miR-34b-3p
0.786
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000519242
Biotype: lincRNA
Gene id: ENSG00000254266
Gene Name: RP11-594N15.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
558-572
0.016
0
7mer
615-634
0.012
1
7mer
509-530
0.004
1
RP11-524N5.1
hsa-miR-34b-3p
0.785
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000619068
Biotype: lincRNA
Gene id: ENSG00000276778
Gene Name: RP11-524N5.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3052-3058
0.020
6
7mer
2904-2921
0.006
1
7mer
2413-2437
0.006
1
RHOA-IT1
hsa-miR-34b-3p
0.785
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000428083
Biotype: sense_intronic
Gene id: ENSG00000235908
Gene Name: RHOA-IT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-34b-3p
Sequence: caaucacuaacuccacugccau
MirBase ID: MIMAT0004676
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
322-345
0.022
0
6mer
124-139
0.006
0
6mer
120-139
0.005
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept