LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-34a-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
XLOC_009625
hsa-miR-34a-5p
0.795
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00021025
Biotype: transcript isomorph
Gene id: XLOC_009625
Gene Name: XLOC_009625
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
142-155
0.033
2
RP11-16K12.1
hsa-miR-34a-5p
0.794
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000316148
Biotype: antisense
Gene id: ENSG00000177699
Gene Name: RP11-16K12.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
775-794
0.033
3
XLOC_008445
hsa-miR-34a-5p
0.794
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018158
Biotype: transcript isomorph
Gene id: XLOC_008445
Gene Name: XLOC_008445
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
694-716
0.033
1
RP11-451B8.1
hsa-miR-34a-5p
0.794
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000462792
Biotype: lincRNA
Gene id: ENSG00000239572
Gene Name: RP11-451B8.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
108-134
0.033
0
RP11-279F6.1
hsa-miR-34a-5p
0.794
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000559025
Biotype: lincRNA
Gene id: ENSG00000245750
Gene Name: RP11-279F6.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
504-528
0.027
1
6mer
50-75
0.005
1
XLOC_002258
hsa-miR-34a-5p
0.793
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004374
Biotype: transcript isomorph
Gene id: XLOC_002258
Gene Name: XLOC_002258
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Breast Normal/Primary
- Kidney Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
92-114
0.016
1
6mer
701-719
0.009
1
7mer
1405-1421
0.005
0
6mer
545-570
0.002
Not Conserved
RP3-340N1.2
hsa-miR-34a-5p
0.793
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000431027
Biotype: lincRNA
Gene id: ENSG00000227066
Gene Name: RP3-340N1.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
2434-2458
0.012
1
6mer
1473-1492
0.008
1
6mer
2402-2426
0.007
0
6mer
190-209
0.006
0
AC005754.8
hsa-miR-34a-5p
0.793
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000606030
Biotype: lincRNA
Gene id: ENSG00000272108
Gene Name: AC005754.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1606-1633
0.026
1
6mer
1175-1193
0.004
1
6mer
266-290
0.003
1
RP11-210M15.2
hsa-miR-34a-5p
0.792
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000559008
Biotype: lincRNA
Gene id: ENSG00000259495
Gene Name: RP11-210M15.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
4321-4341
0.017
0
6mer
6520-6537
0.007
5
6mer
6061-6082
0.003
1
6mer
3862-3884
0.001
1
6mer
2735-2758
0.001
1
6mer
4958-4976
0.001
1
6mer
4757-4777
0.001
1
6mer
4598-4620
0.001
1
6mer
2704-2730
0.001
2
RP11-76I14.1
hsa-miR-34a-5p
0.792
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000537492
Biotype: lincRNA
Gene id: ENSG00000256637
Gene Name: RP11-76I14.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
75-93
0.025
1
6mer
52-65
0.005
6
6mer
493-518
0.003
0
RP11-488P3.1
hsa-miR-34a-5p
0.792
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000433544
Biotype: sense_intronic
Gene id: ENSG00000230439
Gene Name: RP11-488P3.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
11-36
0.028
0
6mer
692-716
0.004
4
AC007192.6
hsa-miR-34a-5p
0.791
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000600364
Biotype: antisense
Gene id: ENSG00000269145
Gene Name: AC007192.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
431-450
0.030
2
6mer
164-188
0.002
2
CITF22-92A6.1
hsa-miR-34a-5p
0.791
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000608290
Biotype: lincRNA
Gene id: ENSG00000273145
Gene Name: CITF22-92A6.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
828-850
0.023
1
7mer
931-950
0.010
1
DNAJB8-AS1
hsa-miR-34a-5p
0.790
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000471626
Biotype: antisense
Gene id: ENSG00000242049
Gene Name: DNAJB8-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1346-1361
0.032
0
WT1-AS
hsa-miR-34a-5p
0.789
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000525436
Biotype: antisense
Gene id: ENSG00000183242
Gene Name: WT1-AS
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
579-606
0.030
2
6mer
716-738
0.002
1
RP11-267M23.4
hsa-miR-34a-5p
0.789
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000523011
Biotype: lincRNA
Gene id: ENSG00000253704
Gene Name: RP11-267M23.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
392-418
0.018
4
7mer
490-502
0.009
4
6mer
76-92
0.005
3
XLOC_004182
hsa-miR-34a-5p
0.789
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008667
Biotype: transcript isomorph
Gene id: XLOC_004182
Gene Name: XLOC_004182
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
- Testes Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
817-836
0.017
Not Conserved
7mer
626-645
0.010
Not Conserved
6mer
184-204
0.005
1
CTA-796E4.5
hsa-miR-34a-5p
0.789
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624243
Biotype: lincRNA
Gene id: ENSG00000280065
Gene Name: CTA-796E4.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
485-504
0.005
2
7mer
23689-23714
0.003
1
6mer
30265-30285
0.003
4
7mer
9262-9279
0.003
2
7mer
3515-3529
0.002
1
6mer
6073-6094
0.002
2
6mer
17147-17173
0.002
2
6mer
18582-18608
0.002
0
6mer
30366-30382
0.002
5
6mer
23442-23467
0.002
0
6mer
30096-30118
0.001
2
6mer
20494-20506
0.001
1
6mer
30513-30528
0.001
0
6mer
16761-16779
0.001
0
6mer
13676-13702
0.001
1
7mer
11263-11281
0.001
0
6mer
30410-30429
0.001
1
6mer
11209-11228
0.001
1
XLOC_006045
hsa-miR-34a-5p
0.789
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013412
Biotype: transcript isomorph
Gene id: XLOC_006045
Gene Name: XLOC_006045
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
336-354
0.017
1
8mer
56-81
0.016
1
RP11-316M21.6
hsa-miR-34a-5p
0.788
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000444359
Biotype: antisense
Gene id: ENSG00000227492
Gene Name: RP11-316M21.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
647-672
0.030
6
6mer
216-239
0.002
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept