LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-34a-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
XLOC_010109
hsa-miR-34a-5p
0.891
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020821
Biotype: transcript isomorph
Gene id: XLOC_010109
Gene Name: XLOC_010109
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5025-5041
0.024
5
8mer
5157-5176
0.017
1
6mer
4903-4930
0.003
1
6mer
3514-3535
0.001
Not Conserved
DIAPH2-AS1
hsa-miR-34a-5p
0.890
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000439759
Biotype: antisense
Gene id: ENSG00000236256
Gene Name: DIAPH2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
718-744
0.019
Not Conserved
7mer
383-404
0.013
4
8mer
453-478
0.011
0
6mer
399-419
0.002
2
XLOC_001935
hsa-miR-34a-5p
0.890
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00005057
Biotype: transcript isomorph
Gene id: XLOC_001935
Gene Name: XLOC_001935
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
754-770
0.045
0
C5orf27
hsa-miR-34a-5p
0.888
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000436592
Biotype: lincRNA
Gene id: ENSG00000236882
Gene Name: C5orf27
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
77-97
0.023
0
8mer
313-332
0.020
0
6mer
1084-1106
0.002
0
XLOC_002161
hsa-miR-34a-5p
0.888
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00005177
Biotype: transcript isomorph
Gene id: XLOC_002161
Gene Name: XLOC_002161
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
725-751
0.040
0
6mer
45-57
0.005
2
LINC00371
hsa-miR-34a-5p
0.888
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000563710
Biotype: lincRNA
Gene id: ENSG00000226792
Gene Name: LINC00371
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
513-532
0.033
1
8mer
1904-1923
0.005
2
6mer
2472-2494
0.003
1
6mer
851-870
0.002
1
LINC01366
hsa-miR-34a-5p
0.888
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000521471
Biotype: lincRNA
Gene id: ENSG00000235172
Gene Name: LINC01366
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
369-395
0.025
0
8mer
737-760
0.015
0
6mer
220-237
0.004
3
XLOC_012891
hsa-miR-34a-5p
0.888
mTTBlnEmP

Gene Details
Chromosome: chr18
Transcript: TCONS_00026572
Biotype: transcript isomorph
Gene id: XLOC_012891
Gene Name: XLOC_012891
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Placenta Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
455-479
0.044
1
XLOC_011620
hsa-miR-34a-5p
0.887
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024310
Biotype: transcript isomorph
Gene id: XLOC_011620
Gene Name: XLOC_011620
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
619-639
0.043
Not Conserved
6mer
383-410
0.002
Not Conserved
ERVH48-1
hsa-miR-34a-5p
0.886
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000617971
Biotype: lincRNA
Gene id: ENSG00000233056
Gene Name: ERVH48-1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
769-791
0.026
0
6mer
418-437
0.009
0
6mer
522-546
0.009
0
RP11-800A3.7
hsa-miR-34a-5p
0.886
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000546324
Biotype: antisense
Gene id: ENSG00000257038
Gene Name: RP11-800A3.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
8-29
0.038
3
7mer
70-90
0.007
1
XLOC_008878
hsa-miR-34a-5p
0.886
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00017740
Biotype: transcript isomorph
Gene id: XLOC_008878
Gene Name: XLOC_008878
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
- Brain Normal/Primary
- Colon Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1181-1202
0.044
0
XLOC_000542
hsa-miR-34a-5p
0.885
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001254
Biotype: transcript isomorph
Gene id: XLOC_000542
Gene Name: XLOC_000542
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
736-750
0.035
1
6mer
456-479
0.006
4
7mer
283-292
0.003
Not Conserved
RP11-768G7.2
hsa-miR-34a-5p
0.885
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000462528
Biotype: lincRNA
Gene id: ENSG00000241213
Gene Name: RP11-768G7.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
276-294
0.044
6
RP11-495O10.1
hsa-miR-34a-5p
0.885
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000521511
Biotype: lincRNA
Gene id: ENSG00000254321
Gene Name: RP11-495O10.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
30-52
0.030
2
7mer
424-445
0.010
1
6mer
245-269
0.003
0
XLOC_006625
hsa-miR-34a-5p
0.884
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013982
Biotype: transcript isomorph
Gene id: XLOC_006625
Gene Name: XLOC_006625
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Kidney Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
208-228
0.027
0
8mer
1125-1151
0.017
1
RP11-634B7.5
hsa-miR-34a-5p
0.884
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000426444
Biotype: lincRNA
Gene id: ENSG00000239395
Gene Name: RP11-634B7.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
429-454
0.044
1
XLOC_002759
hsa-miR-34a-5p
0.884
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006930
Biotype: transcript isomorph
Gene id: XLOC_002759
Gene Name: XLOC_002759
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
150-167
0.031
1
7mer
357-380
0.013
3
XLOC_013020
hsa-miR-34a-5p
0.883
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00027504
Biotype: transcript isomorph
Gene id: XLOC_013020
Gene Name: XLOC_013020
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
222-245
0.044
0
IQCH-AS1
hsa-miR-34a-5p
0.883
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000559298
Biotype: lincRNA
Gene id: ENSG00000259673
Gene Name: IQCH-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
224-241
0.026
1
8mer
1172-1191
0.011
0
7mer
5083-5106
0.004
1
6mer
1353-1375
0.001
0
6mer
794-808
0.001
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept