LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-345-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
CTD-3193K9.11
hsa-miR-345-5p
0.776
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000613683
Biotype: lincRNA
Gene id: ENSG00000273650
Gene Name: CTD-3193K9.11
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
313-325
0.031
4
SPACA6P
hsa-miR-345-5p
0.775
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000573266
Biotype: lincRNA
Gene id: ENSG00000182310
Gene Name: SPACA6P
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
995-1017
0.007
1
7mer
590-611
0.007
1
7mer
768-790
0.005
0
7mer
689-712
0.005
0
7mer
731-750
0.005
0
6mer
479-502
0.004
0
FLJ43879
hsa-miR-345-5p
0.774
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000455228
Biotype: lincRNA
Gene id: ENSG00000227744
Gene Name: FLJ43879
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
3099-3117
0.025
1
8mer
199-220
0.006
Not Conserved
RP11-96A15.1
hsa-miR-345-5p
0.773
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000619313
Biotype: lincRNA
Gene id: ENSG00000278464
Gene Name: RP11-96A15.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
357-383
0.031
1
ARHGAP19-SLIT1
hsa-miR-345-5p
0.773
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: NR_037909.1
Biotype: sense
Gene id: NR_037909.1 (gene)
Gene Name: ARHGAP19-SLIT1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
712-722
0.022
4
6mer
1683-1708
0.008
9
SPACA6P
hsa-miR-345-5p
0.773
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000576093
Biotype: lincRNA
Gene id: ENSG00000182310
Gene Name: SPACA6P
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
594-615
0.007
1
7mer
999-1021
0.007
1
7mer
772-794
0.005
0
7mer
693-716
0.005
0
7mer
735-754
0.005
0
6mer
483-506
0.003
0
RP11-626G11.3
hsa-miR-345-5p
0.773
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000567236
Biotype: antisense
Gene id: ENSG00000261759
Gene Name: RP11-626G11.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
288-303
0.031
4
RP11-582J16.3
hsa-miR-345-5p
0.773
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000517384
Biotype: antisense
Gene id: ENSG00000254230
Gene Name: RP11-582J16.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
479-495
0.031
6
RP1-309I22.2
hsa-miR-345-5p
0.773
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624184
Biotype: sense_overlapping
Gene id: ENSG00000279338
Gene Name: RP1-309I22.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
14294-14320
0.007
6
7mer
15826-15844
0.006
4
7mer
13882-13899
0.004
0
9mer
1689-1716
0.003
0
6mer
3568-3588
0.003
7
6mer
19756-19780
0.001
1
6mer
23858-23873
0.001
1
6mer
15177-15195
0.001
1
6mer
14555-14572
0.001
1
6mer
20981-20994
0.001
0
6mer
24866-24880
0.001
1
6mer
17223-17235
0.001
0
AC092669.6
hsa-miR-345-5p
0.772
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000449673
Biotype: lincRNA
Gene id: ENSG00000225815
Gene Name: AC092669.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
262-279
0.031
4
XLOC_008704
hsa-miR-345-5p
0.772
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018417
Biotype: transcript isomorph
Gene id: XLOC_008704
Gene Name: XLOC_008704
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Skeletal Muscle Normal/Primary


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
562-587
0.031
3
HCG22
hsa-miR-345-5p
0.770
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000570223
Biotype: lincRNA
Gene id: ENSG00000228789
Gene Name: HCG22
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
400-421
0.022
2
8mer
228-249
0.008
1
TTTY12
hsa-miR-345-5p
0.770
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000413466
Biotype: lincRNA
Gene id: ENSG00000237048
Gene Name: TTTY12
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
860-874
0.016
0
6mer
723-733
0.014
0
RP3-395M20.8
hsa-miR-345-5p
0.770
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000449660
Biotype: lincRNA
Gene id: ENSG00000238164
Gene Name: RP3-395M20.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
960-980
0.027
1
8mer
1392-1415
0.004
0
TTTY10
hsa-miR-345-5p
0.769
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000455084
Biotype: lincRNA
Gene id: ENSG00000229236
Gene Name: TTTY10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1544-1562
0.022
0
6mer
1233-1254
0.009
0
XXbac-BPG13B8.10
hsa-miR-345-5p
0.769
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000436804
Biotype: lincRNA
Gene id: ENSG00000229274
Gene Name: XXbac-BPG13B8.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
708-731
0.030
0
RP11-27P7.1
hsa-miR-345-5p
0.768
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000531077
Biotype: lincRNA
Gene id: ENSG00000254775
Gene Name: RP11-27P7.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
274-297
0.030
1
XLOC_001356
hsa-miR-345-5p
0.767
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003581
Biotype: transcript isomorph
Gene id: XLOC_001356
Gene Name: XLOC_001356
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary
- Kidney Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
585-604
0.030
1
XLOC_012312
hsa-miR-345-5p
0.767
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025497
Biotype: transcript isomorph
Gene id: XLOC_012312
Gene Name: XLOC_012312
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Heart Normal/Primary
- Testes Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
466-483
0.030
1
MIRLET7BHG
hsa-miR-345-5p
0.766
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000435439
Biotype: lincRNA
Gene id: ENSG00000197182
Gene Name: MIRLET7BHG
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1729-1743
0.017
1
7mer
1149-1170
0.007
0
8mer
1379-1402
0.005
1
6mer
1232-1252
0.002
2
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept