LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-345-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
LL22NC03-27C5.1
hsa-miR-345-5p
0.795
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624219
Biotype: lincRNA
Gene id: ENSG00000278890
Gene Name: LL22NC03-27C5.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
6-30
0.011
0
7mer
5450-5469
0.010
Not Conserved
7mer
174-194
0.009
1
8mer
5264-5285
0.003
Not Conserved
XLOC_012664
hsa-miR-345-5p
0.795
mTTBlnEmP

Gene Details
Chromosome: chr18
Transcript: TCONS_00026615
Biotype: transcript isomorph
Gene id: XLOC_012664
Gene Name: XLOC_012664
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Breast Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
528-550
0.024
1
6mer
2590-2611
0.004
1
6mer
812-837
0.002
0
6mer
2079-2100
0.002
0
XLOC_004372
hsa-miR-345-5p
0.795
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00009955
Biotype: transcript isomorph
Gene id: XLOC_004372
Gene Name: XLOC_004372
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
179-202
0.017
1
8mer
538-558
0.016
1
PCBP1-AS1
hsa-miR-345-5p
0.794
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000416395
Biotype: antisense
Gene id: ENSG00000179818
Gene Name: PCBP1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
54-74
0.025
8
6mer
147-164
0.008
6
DLEU1
hsa-miR-345-5p
0.793
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: NR_109974.1
Biotype: sense
Gene id: NR_109974.1 (gene)
Gene Name: DLEU1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1098-1119
0.028
1
6mer
1075-1090
0.005
1
RP5-998H6.2
hsa-miR-345-5p
0.792
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000450586
Biotype: lincRNA
Gene id: ENSG00000229957
Gene Name: RP5-998H6.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
188-207
0.022
3
6mer
1853-1874
0.004
2
6mer
1090-1117
0.004
7
6mer
122-134
0.003
0
RP11-275H4.1
hsa-miR-345-5p
0.792
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000460993
Biotype: lincRNA
Gene id: ENSG00000241231
Gene Name: RP11-275H4.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
405-428
0.033
1
RP11-10N23.2
hsa-miR-345-5p
0.792
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000520562
Biotype: antisense
Gene id: ENSG00000253854
Gene Name: RP11-10N23.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
715-726
0.033
1
AC016907.3
hsa-miR-345-5p
0.792
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000455424
Biotype: antisense
Gene id: ENSG00000233862
Gene Name: AC016907.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1825-1849
0.018
2
7mer
312-338
0.011
1
7mer
2228-2237
0.004
1
RHPN1-AS1
hsa-miR-345-5p
0.792
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000518049
Biotype: antisense
Gene id: ENSG00000254389
Gene Name: RHPN1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
226-250
0.027
Not Conserved
6mer
186-204
0.005
0
RP11-367J11.2
hsa-miR-345-5p
0.791
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000500031
Biotype: antisense
Gene id: ENSG00000245748
Gene Name: RP11-367J11.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4046-4072
0.017
2
8mer
1566-1585
0.010
1
7mer
950-964
0.006
1
RP11-119D9.1
hsa-miR-345-5p
0.791
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000511677
Biotype: lincRNA
Gene id: ENSG00000251637
Gene Name: RP11-119D9.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2865-2878
0.021
1
8mer
1369-1386
0.009
Not Conserved
6mer
209-232
0.003
Not Conserved
RP5-945F2.3
hsa-miR-345-5p
0.791
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000446187
Biotype: lincRNA
Gene id: ENSG00000226829
Gene Name: RP5-945F2.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
168-186
0.032
2
ALKBH3-AS1
hsa-miR-345-5p
0.790
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000499194
Biotype: antisense
Gene id: ENSG00000244926
Gene Name: ALKBH3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1524-1547
0.032
1
CTD-2184C24.2
hsa-miR-345-5p
0.790
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000553269
Biotype: antisense
Gene id: ENSG00000254718
Gene Name: CTD-2184C24.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
459-481
0.032
2
RP11-274H24.1
hsa-miR-345-5p
0.789
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000563079
Biotype: lincRNA
Gene id: ENSG00000260239
Gene Name: RP11-274H24.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
251-273
0.018
1
7mer
246-266
0.011
1
6mer
261-281
0.003
2
RP3-412A9.17
hsa-miR-345-5p
0.788
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623789
Biotype: sense_overlapping
Gene id: ENSG00000278920
Gene Name: RP3-412A9.17
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
12517-12532
0.012
3
7mer
8252-8269
0.006
6
8mer
2067-2084
0.004
0
7mer
16597-16621
0.004
Not Conserved
7mer
2398-2425
0.002
1
6mer
4989-5008
0.002
2
6mer
5516-5541
0.001
2
6mer
12668-12693
0.001
0
LINC00454
hsa-miR-345-5p
0.787
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000430978
Biotype: lincRNA
Gene id: ENSG00000226921
Gene Name: LINC00454
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
204-226
0.032
0
SNHG15
hsa-miR-345-5p
0.786
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000577700
Biotype: lincRNA
Gene id: ENSG00000232956
Gene Name: SNHG15
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
183-201
0.032
2
AC092839.4
hsa-miR-345-5p
0.785
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000431130
Biotype: antisense
Gene id: ENSG00000234943
Gene Name: AC092839.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
316-333
0.018
0
7mer
253-269
0.013
3
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept