LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-324-3p


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Gene
miRNA
Score
DIANA Links
MGC15885
hsa-miR-324-3p
0.713
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000560347
Biotype: antisense
Gene id: ENSG00000259458
Gene Name: MGC15885
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1267-1288
0.018
0
7mer
551-567
0.007
0
RP11-775H9.1
hsa-miR-324-3p
0.712
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000511749
Biotype: lincRNA
Gene id: ENSG00000250665
Gene Name: RP11-775H9.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
142-157
0.026
1
STX18-IT1
hsa-miR-324-3p
0.712
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000515487
Biotype: sense_intronic
Gene id: ENSG00000248221
Gene Name: STX18-IT1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
131-147
0.019
1
6mer
290-302
0.004
1
6mer
163-183
0.002
0
XLOC_010791
hsa-miR-324-3p
0.712
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022460
Biotype: transcript isomorph
Gene id: XLOC_010791
Gene Name: XLOC_010791
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
1653-1672
0.006
1
7mer
1978-1995
0.004
Not Conserved
6mer
1144-1164
0.004
6
6mer
1522-1536
0.004
3
6mer
1981-2003
0.004
1
6mer
1053-1074
0.004
4
XLOC_011223
hsa-miR-324-3p
0.712
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023377
Biotype: transcript isomorph
Gene id: XLOC_011223
Gene Name: XLOC_011223
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
59-73
0.011
7
6mer
69-92
0.006
7
8mer+wobble
912-937
0.005
4
6mer
999-1020
0.002
8
8mer+wobble
1116-1135
0.002
1
AC073343.13
hsa-miR-324-3p
0.711
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000413182
Biotype: antisense
Gene id: ENSG00000228010
Gene Name: AC073343.13
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
314-325
0.021
Not Conserved
8mer+wobble
45-66
0.004
0
RP11-421P23.1
hsa-miR-324-3p
0.711
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000517573
Biotype: lincRNA
Gene id: ENSG00000253199
Gene Name: RP11-421P23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
313-336
0.023
0
6mer
182-200
0.002
1
RP1-74M1.3
hsa-miR-324-3p
0.710
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000610135
Biotype: lincRNA
Gene id: ENSG00000272796
Gene Name: RP1-74M1.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1422-1445
0.016
2
8mer
353-377
0.006
1
6mer
284-304
0.004
0
AC027601.1
hsa-miR-324-3p
0.710
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000575922
Biotype: antisense
Gene id: ENSG00000260005
Gene Name: AC027601.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer+wobble
4195-4215
0.014
0
8mer
1559-1577
0.007
0
6mer
1113-1128
0.002
1
6mer
957-974
0.001
1
6mer
3869-3882
0.001
0
6mer
1307-1320
0.001
1
AC114776.3
hsa-miR-324-3p
0.710
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000414159
Biotype: lincRNA
Gene id: ENSG00000235881
Gene Name: AC114776.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer+wobble
1793-1809
0.011
0
6mer
3266-3285
0.005
0
6mer
2887-2905
0.005
1
7mer
2507-2524
0.005
0
6mer
3253-3275
0.000
Not Conserved
KRT73-AS1
hsa-miR-324-3p
0.710
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000552364
Biotype: antisense
Gene id: ENSG00000257495
Gene Name: KRT73-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3276-3299
0.009
0
8mer
2107-2126
0.009
1
8mer
3042-3068
0.004
0
7mer
2882-2902
0.002
1
7mer
1272-1290
0.002
1
TEX26-AS1
hsa-miR-324-3p
0.710
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000587596
Biotype: antisense
Gene id: ENSG00000224743
Gene Name: TEX26-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
219-231
0.025
1
XLOC_003261
hsa-miR-324-3p
0.710
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006665
Biotype: transcript isomorph
Gene id: XLOC_003261
Gene Name: XLOC_003261
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
115-135
0.013
2
7mer
1681-1703
0.006
3
6mer
3326-3339
0.003
1
7mer
1318-1335
0.002
0
6mer
933-952
0.002
0
RP11-214K3.24
hsa-miR-324-3p
0.709
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000621669
Biotype: lincRNA
Gene id: ENSG00000275389
Gene Name: RP11-214K3.24
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
55-75
0.021
1
6mer
1669-1689
0.002
1
6mer
1562-1584
0.001
1
6mer
769-785
0.001
1
XLOC_010731
hsa-miR-324-3p
0.709
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00022122
Biotype: transcript isomorph
Gene id: XLOC_010731
Gene Name: XLOC_010731
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
50-70
0.023
0
6mer
278-292
0.002
0
XLOC_013679
hsa-miR-324-3p
0.709
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00027883
Biotype: transcript isomorph
Gene id: XLOC_013679
Gene Name: XLOC_013679
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3774-3795
0.018
1
7mer
617-636
0.008
0
XLOC_013703
hsa-miR-324-3p
0.708
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028028
Biotype: transcript isomorph
Gene id: XLOC_013703
Gene Name: XLOC_013703
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
253-275
0.025
0
GHRLOS
hsa-miR-324-3p
0.708
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000605014
Biotype: antisense
Gene id: ENSG00000240288
Gene Name: GHRLOS
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
347-364
0.025
1
LINC00555
hsa-miR-324-3p
0.707
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000569288
Biotype: antisense
Gene id: ENSG00000261057
Gene Name: LINC00555
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
177-198
0.025
0
RP11-796E2.4
hsa-miR-324-3p
0.707
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000501008
Biotype: antisense
Gene id: ENSG00000245904
Gene Name: RP11-796E2.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1665-1678
0.025
2
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