LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-324-3p


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Gene
miRNA
Score
DIANA Links
AC025165.8
hsa-miR-324-3p
0.721
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000356672
Biotype: antisense
Gene id: ENSG00000224713
Gene Name: AC025165.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1723-1744
0.013
1
7mer
528-552
0.009
7
7mer
874-897
0.005
7
B4GALT4-AS1
hsa-miR-324-3p
0.721
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000470790
Biotype: antisense
Gene id: ENSG00000240254
Gene Name: B4GALT4-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
96-117
0.021
1
7mer
36-55
0.005
0
TMEM147-AS1
hsa-miR-324-3p
0.721
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000590125
Biotype: antisense
Gene id: ENSG00000236144
Gene Name: TMEM147-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
320-339
0.026
2
XLOC_005118
hsa-miR-324-3p
0.720
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011250
Biotype: transcript isomorph
Gene id: XLOC_005118
Gene Name: XLOC_005118
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
672-692
0.013
1
7mer
400-426
0.013
0
RP11-876N24.2
hsa-miR-324-3p
0.720
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000572017
Biotype: antisense
Gene id: ENSG00000262151
Gene Name: RP11-876N24.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
543-555
0.026
5
KB-1674E1.1
hsa-miR-324-3p
0.720
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623776
Biotype: sense_intronic
Gene id: ENSG00000280413
Gene Name: KB-1674E1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
747-769
0.026
4
ZNF341-AS1
hsa-miR-324-3p
0.720
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000423074
Biotype: antisense
Gene id: ENSG00000230753
Gene Name: ZNF341-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
255-280
0.026
2
RP11-895M11.3
hsa-miR-324-3p
0.720
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000557524
Biotype: lincRNA
Gene id: ENSG00000258798
Gene Name: RP11-895M11.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
72-89
0.026
1
RP13-46H24.1
hsa-miR-324-3p
0.720
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000526431
Biotype: antisense
Gene id: ENSG00000254739
Gene Name: RP13-46H24.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
172-191
0.020
0
6mer
477-502
0.006
0
RP3-470B24.5
hsa-miR-324-3p
0.720
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000538528
Biotype: lincRNA
Gene id: ENSG00000235994
Gene Name: RP3-470B24.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
973-987
0.019
1
7mer
944-964
0.007
0
CTD-2357A8.3
hsa-miR-324-3p
0.720
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000591384
Biotype: lincRNA
Gene id: ENSG00000267123
Gene Name: CTD-2357A8.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
572-596
0.026
0
RP11-104H15.10
hsa-miR-324-3p
0.720
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000575331
Biotype: processed_transcript
Gene id: ENSG00000272884
Gene Name: RP11-104H15.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4776-4797
0.005
2
7mer
4228-4245
0.005
3
8mer+wobble
305-326
0.005
5
7mer
160-176
0.004
7
7mer
2438-2449
0.004
0
6mer
4542-4560
0.001
3
6mer
3794-3812
0.001
1
CTA-243E7.1
hsa-miR-324-3p
0.720
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623980
Biotype: antisense
Gene id: ENSG00000279110
Gene Name: CTA-243E7.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
8944-8963
0.012
2
7mer
7649-7671
0.006
1
7mer
10580-10594
0.004
1
6mer
12953-12979
0.002
Not Conserved
6mer
10798-10823
0.002
2
6mer
9453-9472
0.001
1
LOC100499489
hsa-miR-324-3p
0.719
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: NR_036533.1
Biotype: antisense
Gene id: NR_036533.1 (gene)
Gene Name: LOC100499489
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
210-233
0.016
1
9mer
834-858
0.009
0
6mer
1909-1928
0.001
1
CTB-167B5.2
hsa-miR-324-3p
0.719
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000585152
Biotype: lincRNA
Gene id: ENSG00000264868
Gene Name: CTB-167B5.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
hMSC-BM Bone Marrow Stem/Progenitor


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2817-2842
0.016
0
7mer
685-700
0.007
0
6mer
1138-1161
0.002
2
6mer
1648-1664
0.001
0
FAM223A
hsa-miR-324-3p
0.719
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000593346
Biotype: lincRNA
Gene id: ENSG00000272681
Gene Name: FAM223A
UCSC graphic:
Expression:
  Cell Line Tissue Category
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
400-426
0.022
1
6mer
338-355
0.004
0
RP11-923I11.8
hsa-miR-324-3p
0.719
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000618634
Biotype: antisense
Gene id: ENSG00000278451
Gene Name: RP11-923I11.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
304-322
0.018
1
7mer
238-255
0.008
3
XLOC_013981
hsa-miR-324-3p
0.719
mTTBlnEmP

Gene Details
Chromosome: chr21
Transcript: TCONS_00028752
Biotype: transcript isomorph
Gene id: XLOC_013981
Gene Name: XLOC_013981
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
9024-9041
0.005
0
7mer
3166-3187
0.005
1
6mer
788-810
0.003
0
7mer
5511-5524
0.003
0
6mer
9294-9313
0.003
1
8mer
6556-6581
0.002
0
6mer
4680-4693
0.001
3
7mer
4211-4236
0.001
Not Conserved
6mer
3651-3672
0.001
2
6mer
5995-6011
0.001
1
6mer
4315-4341
0.001
0
6mer
4296-4321
0.000
0
AC004540.5
hsa-miR-324-3p
0.718
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000420774
Biotype: lincRNA
Gene id: ENSG00000214870
Gene Name: AC004540.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
251-273
0.012
2
6mer
46-69
0.007
6
6mer
119-140
0.003
Not Conserved
6mer
186-209
0.002
1
6mer
11-30
0.002
3
FAM223A
hsa-miR-324-3p
0.717
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000598177
Biotype: lincRNA
Gene id: ENSG00000272681
Gene Name: FAM223A
UCSC graphic:
Expression:
  Cell Line Tissue Category
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
405-431
0.022
1
6mer
343-360
0.004
0
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