LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-324-3p


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Gene
miRNA
Score
DIANA Links
TCEB3-AS1
hsa-miR-324-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000447961
Biotype: antisense
Gene id: ENSG00000236810
Gene Name: TCEB3-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
275-293
0.027
3
DIO3OS
hsa-miR-324-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000556120
Biotype: lincRNA
Gene id: ENSG00000258498
Gene Name: DIO3OS
UCSC graphic:
Expression:
  Cell Line Tissue Category
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
583-603
0.015
1
7mer
203-221
0.005
1
7mer
1297-1315
0.004
1
6mer
249-264
0.003
1
RPL34-AS1
hsa-miR-324-3p
0.726
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000507248
Biotype: lincRNA
Gene id: ENSG00000234492
Gene Name: RPL34-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2966-2979
0.027
2
RP11-25E2.1
hsa-miR-324-3p
0.726
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000548488
Biotype: lincRNA
Gene id: ENSG00000257958
Gene Name: RP11-25E2.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
675-691
0.023
Not Conserved
6mer
1367-1386
0.004
1
RP11-66B24.4
hsa-miR-324-3p
0.726
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000560068
Biotype: antisense
Gene id: ENSG00000259583
Gene Name: RP11-66B24.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2994-3011
0.015
0
7mer
1124-1136
0.007
Not Conserved
6mer
2227-2243
0.003
2
6mer
947-971
0.001
Not Conserved
RP11-295D4.1
hsa-miR-324-3p
0.725
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000574705
Biotype: sense_intronic
Gene id: ENSG00000262712
Gene Name: RP11-295D4.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
873-896
0.012
7
7mer
1751-1768
0.004
1
6mer
1330-1351
0.003
8
8mer
1702-1718
0.003
1
7mer
729-746
0.002
1
6mer
1157-1181
0.001
3
6mer
1180-1203
0.001
2
7mer
1095-1120
0.001
3
RP11-923I11.6
hsa-miR-324-3p
0.724
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000562343
Biotype: lincRNA
Gene id: ENSG00000261586
Gene Name: RP11-923I11.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1919-1932
0.010
1
8mer
319-336
0.006
1
8mer
1391-1414
0.004
1
7mer
1646-1660
0.004
0
6mer
763-780
0.003
4
ARHGEF38-IT1
hsa-miR-324-3p
0.723
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000512262
Biotype: sense_intronic
Gene id: ENSG00000249885
Gene Name: ARHGEF38-IT1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
54-71
0.026
0
XLOC_005079
hsa-miR-324-3p
0.723
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00010552
Biotype: transcript isomorph
Gene id: XLOC_005079
Gene Name: XLOC_005079
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1902-1919
0.016
4
8mer
942-962
0.009
1
6mer
1368-1385
0.002
Not Conserved
LINC00461
hsa-miR-324-3p
0.722
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000505030
Biotype: lincRNA
Gene id: ENSG00000245526
Gene Name: LINC00461
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3223-3242
0.008
1
6mer
3388-3408
0.007
7
7mer
3138-3153
0.006
7
7mer
2045-2067
0.004
2
6mer
1418-1431
0.001
1
XLOC_002214
hsa-miR-324-3p
0.722
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004339
Biotype: transcript isomorph
Gene id: XLOC_002214
Gene Name: XLOC_002214
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
559-575
0.015
0
8mer+wobble
134-151
0.012
0
GHRLOS
hsa-miR-324-3p
0.722
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000605105
Biotype: antisense
Gene id: ENSG00000240288
Gene Name: GHRLOS
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
376-393
0.023
1
6mer
91-107
0.003
1
RP4-569M23.5
hsa-miR-324-3p
0.722
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000599904
Biotype: antisense
Gene id: ENSG00000267882
Gene Name: RP4-569M23.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1695-1714
0.012
2
7mer
405-424
0.010
4
6mer
669-687
0.005
3
RP11-1086F11.1
hsa-miR-324-3p
0.722
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000417786
Biotype: sense_intronic
Gene id: ENSG00000225300
Gene Name: RP11-1086F11.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1012-1033
0.026
1
IGF2-AS
hsa-miR-324-3p
0.722
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000381363
Biotype: antisense
Gene id: ENSG00000099869
Gene Name: IGF2-AS
UCSC graphic:
Expression:
  Cell Line Tissue Category
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
796-818
0.013
1
8mer
1743-1768
0.011
1
8mer+wobble
1179-1194
0.003
1
RP3-402G11.27
hsa-miR-324-3p
0.721
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000610050
Biotype: antisense
Gene id: ENSG00000272836
Gene Name: RP3-402G11.27
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
402-426
0.020
1
6mer
278-300
0.006
1
RP11-164P12.3
hsa-miR-324-3p
0.721
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000514269
Biotype: antisense
Gene id: ENSG00000251455
Gene Name: RP11-164P12.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1347-1367
0.026
4
XLOC_013580
hsa-miR-324-3p
0.721
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028234
Biotype: transcript isomorph
Gene id: XLOC_013580
Gene Name: XLOC_013580
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
148-169
0.026
1
AC104654.2
hsa-miR-324-3p
0.721
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000427054
Biotype: lincRNA
Gene id: ENSG00000234362
Gene Name: AC104654.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
542-562
0.026
1
RP11-188C12.3
hsa-miR-324-3p
0.721
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000371390
Biotype: antisense
Gene id: ENSG00000203987
Gene Name: RP11-188C12.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1400-1417
0.021
1
6mer
2976-3002
0.003
1
6mer
2536-2557
0.001
1
6mer
958-976
0.001
1
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