LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-324-3p


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Gene
miRNA
Score
DIANA Links
LINC00928
hsa-miR-324-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: NR_027074.1
Biotype: lincRNA
Gene id: NR_027074.1 (gene)
Gene Name: LINC00928
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1155-1177
0.020
1
7mer
1257-1276
0.006
1
6mer
1626-1649
0.002
0
XLOC_005602
hsa-miR-324-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011130
Biotype: transcript isomorph
Gene id: XLOC_005602
Gene Name: XLOC_005602
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2024-2040
0.010
7
7mer
3001-3021
0.008
2
7mer
438-453
0.008
0
6mer
373-400
0.002
0
RP11-164C12.2
hsa-miR-324-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000556708
Biotype: lincRNA
Gene id: ENSG00000258909
Gene Name: RP11-164C12.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1479-1497
0.014
1
8mer
605-625
0.011
0
6mer
1493-1508
0.002
0
SLC2A1-AS1
hsa-miR-324-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000416689
Biotype: retained_intron
Gene id: ENSG00000227533
Gene Name: SLC2A1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1843-1864
0.021
9
6mer
2491-2504
0.004
2
6mer
1818-1831
0.001
1
6mer
1635-1654
0.001
3
NTRK3-AS1
hsa-miR-324-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000569588
Biotype: lincRNA
Gene id: ENSG00000260305
Gene Name: NTRK3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2433-2457
0.010
1
8mer
401-420
0.008
Not Conserved
6mer
139-159
0.004
2
6mer
177-195
0.003
1
6mer
1407-1426
0.001
1
AP001053.11
hsa-miR-324-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000400385
Biotype: antisense
Gene id: ENSG00000215458
Gene Name: AP001053.11
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3655-3680
0.008
1
6mer
472-492
0.004
1
8mer
2652-2670
0.004
0
7mer
3065-3082
0.004
1
8mer
2494-2518
0.003
0
6mer
1886-1907
0.003
2
6mer
2321-2343
0.001
1
6mer
3511-3529
0.001
1
6mer
2923-2943
0.001
0
XLOC_006483
hsa-miR-324-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013850
Biotype: transcript isomorph
Gene id: XLOC_006483
Gene Name: XLOC_006483
UCSC graphic: -
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
848-871
0.021
0
8mer
297-310
0.006
0
AC093627.8
hsa-miR-324-3p
0.731
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000478759
Biotype: lincRNA
Gene id: ENSG00000242611
Gene Name: AC093627.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
167-193
0.027
1
XLOC_011100
hsa-miR-324-3p
0.731
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022830
Biotype: transcript isomorph
Gene id: XLOC_011100
Gene Name: XLOC_011100
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Liver Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
181-199
0.012
1
7mer
6073-6086
0.006
2
7mer
1825-1841
0.006
2
6mer
4083-4110
0.002
3
6mer
6365-6392
0.002
1
RP11-845C23.3
hsa-miR-324-3p
0.731
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000590318
Biotype: antisense
Gene id: ENSG00000267396
Gene Name: RP11-845C23.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
479-498
0.023
3
6mer
412-424
0.003
1
6mer
214-233
0.002
1
CTB-120L21.1
hsa-miR-324-3p
0.731
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000517708
Biotype: antisense
Gene id: ENSG00000254246
Gene Name: CTB-120L21.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
17-35
0.027
0
XLOC_011573
hsa-miR-324-3p
0.730
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023205
Biotype: transcript isomorph
Gene id: XLOC_011573
Gene Name: XLOC_011573
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1154-1176
0.020
1
7mer
1256-1275
0.006
1
6mer
1625-1648
0.002
0
RP11-44B19.1
hsa-miR-324-3p
0.730
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000606841
Biotype: antisense
Gene id: ENSG00000272411
Gene Name: RP11-44B19.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
6-29
0.023
3
6mer
119-135
0.003
1
RP1-101G11.3
hsa-miR-324-3p
0.730
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624442
Biotype: lincRNA
Gene id: ENSG00000280356
Gene Name: RP1-101G11.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
10406-10430
0.015
1
6mer
9985-9998
0.005
4
6mer
5096-5123
0.003
3
6mer
2661-2681
0.001
1
7mer
7925-7938
0.001
0
6mer
8014-8034
0.001
1
6mer
6721-6745
0.001
0
LINC00518
hsa-miR-324-3p
0.729
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000491317
Biotype: lincRNA
Gene id: ENSG00000183674
Gene Name: LINC00518
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
13-29
0.027
7
XLOC_013597
hsa-miR-324-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00027874
Biotype: transcript isomorph
Gene id: XLOC_013597
Gene Name: XLOC_013597
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2297-2323
0.023
1
7mer
1869-1889
0.004
1
LARGE-AS1
hsa-miR-324-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000453336
Biotype: antisense
Gene id: ENSG00000224973
Gene Name: LARGE-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
548-568
0.015
1
8mer
586-607
0.010
1
7mer
41-56
0.002
1
MROH7-TTC4
hsa-miR-324-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_037641.1
Biotype: sense
Gene id: NR_037641.1 (gene)
Gene Name: MROH7-TTC4
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
22-40
0.009
0
7mer
5477-5497
0.007
0
8mer
55-70
0.005
Not Conserved
6mer
4805-4815
0.003
5
6mer
4269-4287
0.002
9
6mer
3934-3954
0.001
2
RP11-510M2.2
hsa-miR-324-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000567341
Biotype: antisense
Gene id: ENSG00000247324
Gene Name: RP11-510M2.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
44-59
0.027
0
RP11-379F4.4
hsa-miR-324-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000607426
Biotype: antisense
Gene id: ENSG00000240207
Gene Name: RP11-379F4.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
508-528
0.012
1
7mer
580-605
0.011
1
6mer
1693-1706
0.004
1
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