LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-324-3p


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Gene
miRNA
Score
DIANA Links
H1FX-AS1
hsa-miR-324-3p
0.758
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000433902
Biotype: antisense
Gene id: ENSG00000206417
Gene Name: H1FX-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
168-186
0.029
0
RP5-1063M23.1
hsa-miR-324-3p
0.758
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000505276
Biotype: lincRNA
Gene id: ENSG00000250770
Gene Name: RP5-1063M23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
125-140
0.012
1
7mer
809-834
0.009
1
6mer
547-566
0.005
4
7mer
1437-1451
0.001
Not Conserved
6mer
1409-1423
0.001
3
KCTD21-AS1
hsa-miR-324-3p
0.758
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000600795
Biotype: antisense
Gene id: ENSG00000246174
Gene Name: KCTD21-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
A549 Lung Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1432-1455
0.027
0
6mer
1298-1324
0.002
Not Conserved
RP11-739L10.1
hsa-miR-324-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000578831
Biotype: antisense
Gene id: ENSG00000265943
Gene Name: RP11-739L10.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
391-410
0.029
1
RP11-268G13.1
hsa-miR-324-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000569833
Biotype: lincRNA
Gene id: ENSG00000261411
Gene Name: RP11-268G13.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1001-1021
0.029
2
AP000266.7
hsa-miR-324-3p
0.756
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000450936
Biotype: antisense
Gene id: ENSG00000232623
Gene Name: AP000266.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
112-129
0.029
1
RP5-1024G6.8
hsa-miR-324-3p
0.756
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000602943
Biotype: lincRNA
Gene id: ENSG00000270172
Gene Name: RP5-1024G6.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1953-1975
0.014
Not Conserved
7mer
995-1019
0.006
3
6mer
1675-1695
0.005
2
6mer
2145-2161
0.004
0
RP11-903H12.3
hsa-miR-324-3p
0.755
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000554286
Biotype: antisense
Gene id: ENSG00000258451
Gene Name: RP11-903H12.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
376-397
0.027
3
6mer
328-348
0.002
1
APCDD1L-AS1
hsa-miR-324-3p
0.755
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000448374
Biotype: lincRNA
Gene id: ENSG00000231290
Gene Name: APCDD1L-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
hMSC-BM Bone Marrow Stem/Progenitor
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
533-544
0.029
1
AC092669.6
hsa-miR-324-3p
0.754
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000412313
Biotype: lincRNA
Gene id: ENSG00000225815
Gene Name: AC092669.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
694-712
0.026
7
6mer
86-104
0.003
1
LARGE-AS1
hsa-miR-324-3p
0.754
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000438159
Biotype: antisense
Gene id: ENSG00000224973
Gene Name: LARGE-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
566-586
0.014
1
8mer
604-625
0.012
1
7mer
15-30
0.002
1
XLOC_004584
hsa-miR-324-3p
0.754
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00010118
Biotype: transcript isomorph
Gene id: XLOC_004584
Gene Name: XLOC_004584
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4300-4317
0.024
3
6mer
3096-3113
0.002
3
6mer
2452-2474
0.001
3
6mer
2667-2684
0.001
2
GHRLOS
hsa-miR-324-3p
0.753
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000603771
Biotype: antisense
Gene id: ENSG00000240288
Gene Name: GHRLOS
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
405-422
0.026
1
6mer
122-136
0.003
1
XLOC_008525
hsa-miR-324-3p
0.752
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018247
Biotype: transcript isomorph
Gene id: XLOC_008525
Gene Name: XLOC_008525
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
159-173
0.029
3
AC002398.11
hsa-miR-324-3p
0.752
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000591091
Biotype: antisense
Gene id: ENSG00000267439
Gene Name: AC002398.11
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1622-1638
0.021
0
6mer
1217-1238
0.004
3
7mer
1525-1540
0.003
4
SACS-AS1
hsa-miR-324-3p
0.752
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000443092
Biotype: lincRNA
Gene id: ENSG00000229558
Gene Name: SACS-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
46-68
0.027
0
6mer
154-179
0.002
0
RP11-514D23.1
hsa-miR-324-3p
0.751
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: NR_038438.1
Biotype: lincRNA
Gene id: NR_038438.1 (gene)
Gene Name: RP11-514D23.1
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1533-1549
0.024
0
6mer
252-277
0.003
0
7mer
1042-1066
0.002
0
XLOC_011813
hsa-miR-324-3p
0.751
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024297
Biotype: transcript isomorph
Gene id: XLOC_011813
Gene Name: XLOC_011813
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1537-1553
0.024
0
6mer
256-281
0.003
0
7mer
1046-1070
0.002
0
RP11-769N19.2
hsa-miR-324-3p
0.751
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000547084
Biotype: sense_intronic
Gene id: ENSG00000257880
Gene Name: RP11-769N19.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
206-228
0.029
1
AC092669.6
hsa-miR-324-3p
0.750
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000449673
Biotype: lincRNA
Gene id: ENSG00000225815
Gene Name: AC092669.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
682-700
0.026
7
6mer
74-92
0.003
1
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