LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-324-3p


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Gene
miRNA
Score
DIANA Links
MIR194-2
hsa-miR-324-3p
0.798
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000413053
Biotype: lincRNA
Gene id: ENSG00000229719
Gene Name: MIR194-2
UCSC graphic:
Expression:
  Cell Line Tissue Category
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3392-3411
0.027
1
7mer
3307-3324
0.004
1
6mer
2243-2267
0.003
5
MUC19
hsa-miR-324-3p
0.797
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000454784
Biotype: processed_transcript
Gene id: ENSG00000205592
Gene Name: MUC19
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
19012-19027
0.011
1
6mer
24562-24576
0.004
3
7mer
19228-19243
0.003
1
8mer+wobble
20161-20182
0.003
2
6mer
1074-1096
0.003
2
6mer
729-748
0.003
0
7mer
4920-4942
0.002
1
6mer
19826-19851
0.001
1
6mer
18798-18823
0.001
1
6mer
19536-19552
0.001
1
6mer
19284-19309
0.001
1
6mer
5775-5790
0.001
1
6mer
19556-19581
0.000
2
6mer
20186-20211
0.000
2
RP11-526A4.1
hsa-miR-324-3p
0.797
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000511993
Biotype: lincRNA
Gene id: ENSG00000234828
Gene Name: RP11-526A4.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1952-1961
0.033
1
RP5-1142A6.8
hsa-miR-324-3p
0.797
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000333666
Biotype: antisense
Gene id: ENSG00000182376
Gene Name: RP5-1142A6.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
615-635
0.020
1
8mer
126-144
0.013
Not Conserved
6mer
406-422
0.001
0
RP11-359N5.1
hsa-miR-324-3p
0.797
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000554445
Biotype: lincRNA
Gene id: ENSG00000259110
Gene Name: RP11-359N5.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
19-36
0.033
0
STARD7-AS1
hsa-miR-324-3p
0.797
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000432267
Biotype: retained_intron
Gene id: ENSG00000204685
Gene Name: STARD7-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1225-1251
0.027
0
6mer
379-390
0.003
2
7mer
883-909
0.003
0
bP-21264C1.2
hsa-miR-324-3p
0.796
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000623409
Biotype: lincRNA
Gene id: ENSG00000278932
Gene Name: bP-21264C1.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
467-482
0.017
0
6mer
314-331
0.016
0
RP11-370A5.1
hsa-miR-324-3p
0.795
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000581177
Biotype: antisense
Gene id: ENSG00000266850
Gene Name: RP11-370A5.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
411-422
0.033
1
RP11-201A3.1
hsa-miR-324-3p
0.795
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000569873
Biotype: lincRNA
Gene id: ENSG00000261182
Gene Name: RP11-201A3.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1907-1930
0.028
3
6mer
43-60
0.005
3
XLOC_007069
hsa-miR-324-3p
0.795
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014990
Biotype: transcript isomorph
Gene id: XLOC_007069
Gene Name: XLOC_007069
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
332-352
0.033
2
XLOC_013826
hsa-miR-324-3p
0.794
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028717
Biotype: transcript isomorph
Gene id: XLOC_013826
Gene Name: XLOC_013826
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
753-775
0.033
1
RP5-1085F17.3
hsa-miR-324-3p
0.794
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000569087
Biotype: lincRNA
Gene id: ENSG00000260257
Gene Name: RP5-1085F17.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1883-1902
0.030
Not Conserved
6mer
712-735
0.003
1
COL18A1-AS1
hsa-miR-324-3p
0.794
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000397787
Biotype: antisense
Gene id: ENSG00000183535
Gene Name: COL18A1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2845-2867
0.022
1
6mer
3074-3098
0.003
0
6mer
3212-3236
0.003
0
6mer
3239-3257
0.002
1
6mer
766-784
0.001
0
6mer
1417-1434
0.001
Not Conserved
6mer
1382-1403
0.000
1
CTC-459F4.3
hsa-miR-324-3p
0.793
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000588784
Biotype: lincRNA
Gene id: ENSG00000267575
Gene Name: CTC-459F4.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
441-460
0.016
0
6mer
536-557
0.008
0
7mer
554-573
0.007
0
7mer
302-326
0.002
Not Conserved
RP11-15B24.5
hsa-miR-324-3p
0.793
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000590791
Biotype: lincRNA
Gene id: ENSG00000228430
Gene Name: RP11-15B24.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
597-619
0.033
3
SPACA6P-AS
hsa-miR-324-3p
0.793
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000602324
Biotype: lincRNA
Gene id: ENSG00000269959
Gene Name: SPACA6P-AS
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2573-2584
0.011
1
7mer
3624-3645
0.009
1
8mer
2447-2464
0.007
1
8mer
3442-3458
0.004
1
7mer
2524-2542
0.001
1
INO80B-WBP1
hsa-miR-324-3p
0.793
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_037849.1
Biotype: sense
Gene id: NR_037849.1 (gene)
Gene Name: INO80B-WBP1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2002-2025
0.029
2
7mer
1647-1668
0.002
2
6mer
769-787
0.001
2
6mer
954-980
0.001
0
XLOC_004405
hsa-miR-324-3p
0.792
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00009979
Biotype: transcript isomorph
Gene id: XLOC_004405
Gene Name: XLOC_004405
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
667-682
0.033
0
RP11-526A4.1
hsa-miR-324-3p
0.792
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000510975
Biotype: lincRNA
Gene id: ENSG00000234828
Gene Name: RP11-526A4.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
327-336
0.033
1
AC009228.1
hsa-miR-324-3p
0.792
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000430105
Biotype: antisense
Gene id: ENSG00000242628
Gene Name: AC009228.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
30-48
0.033
1
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