LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-324-3p


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Gene
miRNA
Score
DIANA Links
XLOC_001649
hsa-miR-324-3p
0.835
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003843
Biotype: transcript isomorph
Gene id: XLOC_001649
Gene Name: XLOC_001649
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
97-112
0.032
1
6mer
275-297
0.005
3
RP11-122F24.1
hsa-miR-324-3p
0.835
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000512838
Biotype: lincRNA
Gene id: ENSG00000250974
Gene Name: RP11-122F24.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
321-342
0.034
0
6mer
58-75
0.004
1
ALG9-IT1
hsa-miR-324-3p
0.833
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000531305
Biotype: sense_intronic
Gene id: ENSG00000254450
Gene Name: ALG9-IT1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
490-509
0.037
1
AC007326.10
hsa-miR-324-3p
0.832
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624224
Biotype: lincRNA
Gene id: ENSG00000280418
Gene Name: AC007326.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1284-1307
0.007
0
6mer
7101-7121
0.005
1
8mer
3530-3551
0.005
0
6mer
6214-6234
0.003
3
8mer
5628-5644
0.003
1
7mer
936-954
0.003
0
8mer
3785-3801
0.003
0
6mer
6866-6889
0.002
1
6mer
4506-4521
0.002
1
7mer
2461-2487
0.001
1
6mer
6106-6117
0.001
1
6mer
2744-2762
0.001
0
6mer
6973-6996
0.001
Not Conserved
6mer
3395-3418
0.001
0
RP5-999L4.2
hsa-miR-324-3p
0.832
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000616029
Biotype: lincRNA
Gene id: ENSG00000275142
Gene Name: RP5-999L4.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
163-184
0.029
1
8mer
30-49
0.008
Not Conserved
RPL34-AS1
hsa-miR-324-3p
0.831
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000509984
Biotype: lincRNA
Gene id: ENSG00000234492
Gene Name: RPL34-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
307-320
0.037
2
CTA-544A11.1
hsa-miR-324-3p
0.830
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624411
Biotype: antisense
Gene id: ENSG00000279802
Gene Name: CTA-544A11.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3769-3784
0.016
2
8mer
11880-11896
0.015
0
6mer
7315-7325
0.002
2
7mer
4189-4205
0.002
1
7mer
8128-8147
0.002
1
RP11-326I11.4
hsa-miR-324-3p
0.830
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000604660
Biotype: lincRNA
Gene id: ENSG00000271538
Gene Name: RP11-326I11.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
- Brain Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
658-671
0.033
0
6mer
683-708
0.003
Not Conserved
U73166.2
hsa-miR-324-3p
0.829
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000426302
Biotype: lincRNA
Gene id: ENSG00000230454
Gene Name: U73166.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
261-286
0.036
0
XLOC_005808
hsa-miR-324-3p
0.829
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012253
Biotype: transcript isomorph
Gene id: XLOC_005808
Gene Name: XLOC_005808
UCSC graphic: -
Expression:
  Cell Line Tissue Category
Fibroblasts Foreskin Normal/Primary
Fibroblasts Lung Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
927-944
0.031
1
6mer
60-82
0.006
2
GTF3C2-AS1
hsa-miR-324-3p
0.828
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000590383
Biotype: antisense
Gene id: ENSG00000234945
Gene Name: GTF3C2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
99-115
0.031
7
7mer
236-256
0.006
1
LL21NC02-1C16.1
hsa-miR-324-3p
0.828
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000609461
Biotype: sense_intronic
Gene id: ENSG00000273027
Gene Name: LL21NC02-1C16.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
367-387
0.020
1
7mer
422-445
0.017
1
CTC-435M10.10
hsa-miR-324-3p
0.828
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000598988
Biotype: sense_intronic
Gene id: ENSG00000268987
Gene Name: CTC-435M10.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
53-69
0.020
2
8mer
25-47
0.017
0
LINC01320
hsa-miR-324-3p
0.828
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000604250
Biotype: lincRNA
Gene id: ENSG00000228262
Gene Name: LINC01320
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
170-190
0.036
1
RBAKDN
hsa-miR-324-3p
0.828
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000498308
Biotype: lincRNA
Gene id: ENSG00000273313
Gene Name: RBAKDN
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
10-28
0.034
1
6mer
232-247
0.002
0
XLOC_007030
hsa-miR-324-3p
0.827
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014512
Biotype: transcript isomorph
Gene id: XLOC_007030
Gene Name: XLOC_007030
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
41-60
0.036
1
RP11-24M17.4
hsa-miR-324-3p
0.827
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000623240
Biotype: TEC
Gene id: ENSG00000260288
Gene Name: RP11-24M17.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1500-1516
0.020
1
7mer
234-258
0.009
0
7mer
255-271
0.007
0
DKFZp779M0652
hsa-miR-324-3p
0.827
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: NR_027134.1
Biotype: sense
Gene id: NR_027134.1 (gene)
Gene Name: DKFZp779M0652
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
148-168
0.036
1
RP11-298I3.4
hsa-miR-324-3p
0.827
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000557615
Biotype: antisense
Gene id: ENSG00000258457
Gene Name: RP11-298I3.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
81-97
0.022
2
8mer
68-89
0.013
4
6mer
56-82
0.002
1
LINC01523
hsa-miR-324-3p
0.826
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000425385
Biotype: lincRNA
Gene id: ENSG00000229522
Gene Name: LINC01523
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
243-263
0.033
1
6mer
41-65
0.003
0
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