LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-298


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-506N2.1
hsa-miR-298
0.937
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000513551
Biotype: lincRNA
Gene id: ENSG00000251339
Gene Name: RP11-506N2.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
- Testes Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
117-134
0.055
0
LINC00664
hsa-miR-298
0.936
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000599078
Biotype: lincRNA
Gene id: ENSG00000268658
Gene Name: LINC00664
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1876-1896
0.026
1
7mer
3480-3497
0.012
1
8mer
482-501
0.009
Not Conserved
7mer
1124-1147
0.005
0
6mer
1231-1250
0.001
0
LINC01287
hsa-miR-298
0.936
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000416982
Biotype: lincRNA
Gene id: ENSG00000234722
Gene Name: LINC01287
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1588-1613
0.029
0
7mer
1507-1533
0.013
0
7mer
1887-1908
0.007
Not Conserved
9mer
2036-2061
0.004
Not Conserved
7mer
1949-1969
0.002
Not Conserved
XLOC_011529
hsa-miR-298
0.935
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023739
Biotype: transcript isomorph
Gene id: XLOC_011529
Gene Name: XLOC_011529
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
141-162
0.054
1
LINC01151
hsa-miR-298
0.935
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000521608
Biotype: lincRNA
Gene id: ENSG00000253819
Gene Name: LINC01151
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
54-70
0.023
1
7mer
425-439
0.016
1
8mer
49-70
0.011
1
6mer
76-92
0.005
1
RP1-309I22.2
hsa-miR-298
0.934
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624184
Biotype: sense_overlapping
Gene id: ENSG00000279338
Gene Name: RP1-309I22.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
7069-7095
0.007
1
7mer
25552-25573
0.006
4
7mer
27289-27315
0.005
1
7mer
22173-22197
0.005
1
7mer
26554-26572
0.003
1
7mer
3997-4012
0.003
3
6mer
28495-28506
0.003
1
6mer
10274-10287
0.002
3
7mer
21623-21645
0.002
3
7mer
15363-15379
0.002
2
6mer
20046-20063
0.002
1
6mer
26318-26343
0.002
1
6mer
26086-26108
0.002
7
6mer
11570-11586
0.002
3
6mer
15148-15167
0.001
5
7mer
12943-12958
0.001
0
6mer
15952-15972
0.001
3
6mer
5384-5411
0.001
1
6mer
6339-6357
0.001
1
6mer
22001-22013
0.001
1
6mer
3884-3903
0.001
0
6mer
1313-1339
0.001
2
6mer
25242-25262
0.001
Not Conserved
DLX6-AS1
hsa-miR-298
0.934
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000431497
Biotype: antisense
Gene id: ENSG00000231764
Gene Name: DLX6-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
127-152
0.042
8
6mer
336-347
0.005
3
6mer
4039-4064
0.003
2
6mer
1687-1702
0.002
3
6mer
1917-1934
0.002
2
DLX6-AS1
hsa-miR-298
0.933
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_015448.1
Biotype: antisense
Gene id: NR_015448.1 (gene)
Gene Name: DLX6-AS1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1938-1952
0.031
7
8mer
1272-1294
0.020
1
6mer
1052-1071
0.002
1
CTC-338M12.4
hsa-miR-298
0.933
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000599439
Biotype: retained_intron
Gene id: ENSG00000233937
Gene Name: CTC-338M12.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1124-1144
0.045
4
6mer
1382-1390
0.009
4
AC012594.1
hsa-miR-298
0.932
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000622590
Biotype: antisense
Gene id: ENSG00000231898
Gene Name: AC012594.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
687-704
0.030
2
7mer
388-409
0.018
6
6mer
26-49
0.005
3
RP13-16H11.7
hsa-miR-298
0.932
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000454991
Biotype: lincRNA
Gene id: ENSG00000234296
Gene Name: RP13-16H11.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
93-112
0.053
1
LL22NC03-86G7.1
hsa-miR-298
0.932
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000458178
Biotype: antisense
Gene id: ENSG00000224086
Gene Name: LL22NC03-86G7.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
24214-24233
0.007
3
8mer
13703-13728
0.006
1
7mer
17974-17999
0.005
0
6mer
22701-22716
0.003
9
7mer
15965-15991
0.003
1
7mer
13262-13281
0.003
1
7mer
8787-8808
0.003
1
7mer
26964-26984
0.003
0
6mer
20834-20859
0.002
1
6mer
14179-14205
0.002
1
6mer
37101-37112
0.002
Not Conserved
7mer
1092-1116
0.002
1
7mer
13328-13353
0.002
0
7mer
28717-28738
0.002
1
6mer
9096-9119
0.001
3
6mer
5089-5104
0.001
2
6mer
34427-34452
0.001
1
6mer
12659-12676
0.001
1
6mer
32882-32905
0.001
2
7mer
33131-33144
0.001
2
6mer
2330-2350
0.001
0
6mer
18228-18239
0.001
0
6mer
20946-20971
0.001
0
6mer
12719-12742
0.000
1
RP11-473M20.9
hsa-miR-298
0.931
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000577123
Biotype: lincRNA
Gene id: ENSG00000262370
Gene Name: RP11-473M20.9
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
530-549
0.053
0
RP11-424G14.1
hsa-miR-298
0.930
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000566193
Biotype: lincRNA
Gene id: ENSG00000260197
Gene Name: RP11-424G14.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
68-90
0.036
0
7mer
1712-1727
0.009
0
7mer
2031-2053
0.008
0
DLX6-AS1
hsa-miR-298
0.926
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000605417
Biotype: antisense
Gene id: ENSG00000231764
Gene Name: DLX6-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
127-152
0.034
8
6mer
3816-3841
0.009
9
6mer
336-347
0.005
3
6mer
1687-1702
0.002
3
6mer
1917-1934
0.002
2
RP11-154D17.1
hsa-miR-298
0.926
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000437181
Biotype: lincRNA
Gene id: ENSG00000233926
Gene Name: RP11-154D17.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
325-343
0.050
5
6mer
1180-1192
0.002
1
XLOC_000855
hsa-miR-298
0.926
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000531
Biotype: transcript isomorph
Gene id: XLOC_000855
Gene Name: XLOC_000855
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Colon Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
446-468
0.035
1
7mer
1570-1588
0.006
0
8mer
176-198
0.006
0
7mer
1372-1397
0.005
1
RP11-111F5.4
hsa-miR-298
0.925
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000377518
Biotype: retained_intron
Gene id: ENSG00000204802
Gene Name: RP11-111F5.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
302-326
0.021
0
6mer
225-243
0.016
0
6mer
261-278
0.013
0
7mer
2191-2210
0.003
Not Conserved
TTLL7-IT1
hsa-miR-298
0.925
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000455929
Biotype: sense_intronic
Gene id: ENSG00000233061
Gene Name: TTLL7-IT1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2222-2231
0.025
1
7mer
278-298
0.023
1
6mer
2025-2045
0.005
1
NUTM2B-AS1
hsa-miR-298
0.925
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000610681
Biotype: antisense
Gene id: ENSG00000225484
Gene Name: NUTM2B-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
37-57
0.029
3
7mer
72-95
0.020
1
8mer
2546-2562
0.003
Not Conserved
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept