LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-298


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
CTD-2171N6.1
hsa-miR-298
0.756
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000589125
Biotype: lincRNA
Gene id: ENSG00000267013
Gene Name: CTD-2171N6.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2546-2561
0.018
1
7mer
878-905
0.011
2
XLOC_001644
hsa-miR-298
0.755
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003838
Biotype: transcript isomorph
Gene id: XLOC_001644
Gene Name: XLOC_001644
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
79-95
0.029
2
XLOC_006793
hsa-miR-298
0.754
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014696
Biotype: transcript isomorph
Gene id: XLOC_006793
Gene Name: XLOC_006793
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
651-678
0.029
1
RP11-481G8.2
hsa-miR-298
0.754
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000427035
Biotype: lincRNA
Gene id: ENSG00000229569
Gene Name: RP11-481G8.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
146-169
0.011
1
7mer
31-53
0.010
1
7mer
1958-1980
0.005
1
6mer
1351-1361
0.001
Not Conserved
6mer
1231-1247
0.001
Not Conserved
AC008069.1
hsa-miR-298
0.754
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000423925
Biotype: lincRNA
Gene id: ENSG00000223536
Gene Name: AC008069.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
29-48
0.029
1
XLOC_006688
hsa-miR-298
0.753
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014578
Biotype: transcript isomorph
Gene id: XLOC_006688
Gene Name: XLOC_006688
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
442-467
0.017
1
7mer
378-404
0.012
1
CTA-373H7.7
hsa-miR-298
0.753
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000382641
Biotype: lincRNA
Gene id: ENSG00000206028
Gene Name: CTA-373H7.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2432-2455
0.015
1
6mer
2242-2266
0.008
8
6mer
388-401
0.004
1
6mer
673-693
0.002
0
FLJ42627
hsa-miR-298
0.753
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000563449
Biotype: antisense
Gene id: ENSG00000261613
Gene Name: FLJ42627
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
289-315
0.016
0
6mer
273-289
0.007
3
6mer
110-122
0.006
1
RP11-133L14.5
hsa-miR-298
0.753
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000544225
Biotype: antisense
Gene id: ENSG00000256803
Gene Name: RP11-133L14.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
444-470
0.015
4
7mer
610-632
0.014
1
XLOC_009432
hsa-miR-298
0.753
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019631
Biotype: transcript isomorph
Gene id: XLOC_009432
Gene Name: XLOC_009432
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1704-1725
0.014
0
6mer
786-804
0.006
7
7mer
981-999
0.006
1
6mer
303-323
0.004
1
XLOC_003527
hsa-miR-298
0.752
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008060
Biotype: transcript isomorph
Gene id: XLOC_003527
Gene Name: XLOC_003527
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
15-41
0.016
1
8mer
1591-1617
0.009
1
6mer
1515-1540
0.004
1
SNHG6
hsa-miR-298
0.752
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: NR_002599.1
Biotype: antisense
Gene id: NR_002599.1 (gene)
Gene Name: SNHG6
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
199-225
0.029
1
AF178030.2
hsa-miR-298
0.752
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000415088
Biotype: antisense
Gene id: ENSG00000227170
Gene Name: AF178030.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
155-179
0.022
3
6mer
255-278
0.007
4
RP11-391M1.4
hsa-miR-298
0.752
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000607057
Biotype: lincRNA
Gene id: ENSG00000272452
Gene Name: RP11-391M1.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1233-1255
0.029
1
RP11-10A14.5
hsa-miR-298
0.752
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000523747
Biotype: lincRNA
Gene id: ENSG00000248538
Gene Name: RP11-10A14.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
425-445
0.029
1
RP11-404K5.4
hsa-miR-298
0.751
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000512746
Biotype: lincRNA
Gene id: ENSG00000251250
Gene Name: RP11-404K5.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
205-230
0.024
0
6mer
160-180
0.005
0
CTC-457E21.1
hsa-miR-298
0.751
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000562262
Biotype: sense_intronic
Gene id: ENSG00000260599
Gene Name: CTC-457E21.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
289-315
0.011
0
9mer
2859-2886
0.010
Not Conserved
9mer
2549-2572
0.006
0
6mer
2597-2617
0.002
0
RP4-751H13.7
hsa-miR-298
0.751
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000608963
Biotype: antisense
Gene id: ENSG00000273419
Gene Name: RP4-751H13.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1346-1366
0.024
3
7mer
1951-1969
0.003
1
6mer
2760-2781
0.001
1
6mer
2705-2726
0.001
3
RP4-565E6.1
hsa-miR-298
0.751
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000599640
Biotype: lincRNA
Gene id: ENSG00000227733
Gene Name: RP4-565E6.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
hMSC-BM Bone Marrow Stem/Progenitor
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
17-41
0.021
0
6mer
3707-3730
0.004
2
7mer
3629-3649
0.003
Not Conserved
RP3-428L16.2
hsa-miR-298
0.751
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000608721
Biotype: antisense
Gene id: ENSG00000272841
Gene Name: RP3-428L16.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
83-106
0.028
0
6mer
1797-1821
0.001
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept