LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-298


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-10A14.5
hsa-miR-298
0.785
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000512942
Biotype: lincRNA
Gene id: ENSG00000248538
Gene Name: RP11-10A14.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
543-563
0.026
1
7mer
191-207
0.006
0
XLOC_004959
hsa-miR-298
0.785
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00010443
Biotype: transcript isomorph
Gene id: XLOC_004959
Gene Name: XLOC_004959
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Liver Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
11-37
0.032
0
LINC01106
hsa-miR-298
0.785
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000448359
Biotype: lincRNA
Gene id: ENSG00000175772
Gene Name: LINC01106
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1848-1864
0.014
2
8mer
2394-2412
0.012
1
6mer
2355-2373
0.006
1
XXbac-B33L19.6
hsa-miR-298
0.785
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000620909
Biotype: lincRNA
Gene id: ENSG00000277017
Gene Name: XXbac-B33L19.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
728-748
0.032
0
LINC00326
hsa-miR-298
0.784
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000434443
Biotype: lincRNA
Gene id: ENSG00000231023
Gene Name: LINC00326
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
473-489
0.018
1
7mer
41-56
0.013
1
RP11-432I5.4
hsa-miR-298
0.784
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000563557
Biotype: lincRNA
Gene id: ENSG00000260612
Gene Name: RP11-432I5.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
721-732
0.032
4
XLOC_013064
hsa-miR-298
0.784
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00027536
Biotype: transcript isomorph
Gene id: XLOC_013064
Gene Name: XLOC_013064
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
348-367
0.019
1
6mer
1710-1731
0.008
1
6mer
2086-2109
0.005
0
XLOC_004072
hsa-miR-298
0.783
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00007434
Biotype: transcript isomorph
Gene id: XLOC_004072
Gene Name: XLOC_004072
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1254-1271
0.032
4
LINC00632
hsa-miR-298
0.783
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000602830
Biotype: lincRNA
Gene id: ENSG00000203930
Gene Name: LINC00632
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
535-556
0.032
1
AC012594.1
hsa-miR-298
0.783
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000609725
Biotype: antisense
Gene id: ENSG00000231898
Gene Name: AC012594.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
240-258
0.025
6
6mer
7-30
0.006
3
XLOC_011597
hsa-miR-298
0.783
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023817
Biotype: transcript isomorph
Gene id: XLOC_011597
Gene Name: XLOC_011597
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Heart Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
81-105
0.025
0
7mer
250-270
0.006
1
RP11-629G13.1
hsa-miR-298
0.783
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000500537
Biotype: antisense
Gene id: ENSG00000247416
Gene Name: RP11-629G13.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
48-72
0.030
1
7mer
888-909
0.001
Not Conserved
XLOC_009818
hsa-miR-298
0.783
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020191
Biotype: transcript isomorph
Gene id: XLOC_009818
Gene Name: XLOC_009818
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1287-1302
0.014
1
6mer
927-946
0.009
4
7mer
274-294
0.009
0
LINC01059
hsa-miR-298
0.783
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000525757
Biotype: lincRNA
Gene id: ENSG00000255414
Gene Name: LINC01059
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2180-2207
0.016
0
7mer
1857-1881
0.011
1
6mer
177-189
0.004
0
XLOC_011623
hsa-miR-298
0.783
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024244
Biotype: transcript isomorph
Gene id: XLOC_011623
Gene Name: XLOC_011623
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1542-1568
0.019
1
6mer
1568-1584
0.007
4
6mer
1735-1747
0.005
1
XLOC_007542
hsa-miR-298
0.782
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00016146
Biotype: transcript isomorph
Gene id: XLOC_007542
Gene Name: XLOC_007542
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
38-57
0.015
9
7mer
109-136
0.011
0
6mer
329-351
0.005
2
CFLAR-AS1
hsa-miR-298
0.782
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000595372
Biotype: antisense
Gene id: ENSG00000226312
Gene Name: CFLAR-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
508-530
0.032
1
INTS6-AS1
hsa-miR-298
0.782
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000601318
Biotype: antisense
Gene id: ENSG00000236778
Gene Name: INTS6-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
535-554
0.032
0
RP11-533E19.5
hsa-miR-298
0.782
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000567904
Biotype: lincRNA
Gene id: ENSG00000260360
Gene Name: RP11-533E19.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
917-939
0.032
4
RP11-362K14.7
hsa-miR-298
0.781
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000602913
Biotype: antisense
Gene id: ENSG00000270135
Gene Name: RP11-362K14.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
246-256
0.032
5
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept