LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-298


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP4-671O14.6
hsa-miR-298
0.828
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624919
Biotype: sense_overlapping
Gene id: ENSG00000280434
Gene Name: RP4-671O14.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
13252-13275
0.015
1
7mer
2098-2117
0.004
1
8mer
6449-6472
0.004
1
7mer
1955-1976
0.003
0
6mer
417-435
0.003
3
6mer
315-340
0.002
0
9mer
3489-3505
0.002
0
6mer
9888-9913
0.002
0
6mer
4568-4580
0.002
2
6mer
7575-7591
0.001
1
6mer
4231-4254
0.000
1
AE000661.37
hsa-miR-298
0.828
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000545498
Biotype: lincRNA
Gene id: ENSG00000251002
Gene Name: AE000661.37
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
79-98
0.025
4
7mer
303-322
0.011
1
XLOC_001543
hsa-miR-298
0.827
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00002942
Biotype: transcript isomorph
Gene id: XLOC_001543
Gene Name: XLOC_001543
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
76-91
0.036
0
RP13-514E23.1
hsa-miR-298
0.826
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000564854
Biotype: sense_overlapping
Gene id: ENSG00000261496
Gene Name: RP13-514E23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
288-301
0.022
0
6mer
644-660
0.009
9
6mer
203-214
0.006
4
RP11-44F14.8
hsa-miR-298
0.826
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000571340
Biotype: lincRNA
Gene id: ENSG00000262714
Gene Name: RP11-44F14.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1573-1595
0.036
1
KB-1674E1.1
hsa-miR-298
0.825
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623776
Biotype: sense_intronic
Gene id: ENSG00000280413
Gene Name: KB-1674E1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4686-4707
0.018
1
7mer
321-347
0.016
2
6mer
3546-3560
0.003
1
RP11-362K2.2
hsa-miR-298
0.825
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000548969
Biotype: lincRNA
Gene id: ENSG00000258231
Gene Name: RP11-362K2.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
926-953
0.030
5
7mer
353-370
0.006
1
AE000661.37
hsa-miR-298
0.825
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000514473
Biotype: antisense
Gene id: ENSG00000251002
Gene Name: AE000661.37
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
893-912
0.013
4
7mer
1557-1580
0.012
3
8mer
1552-1569
0.010
1
RP11-362K2.2
hsa-miR-298
0.825
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000546977
Biotype: lincRNA
Gene id: ENSG00000258231
Gene Name: RP11-362K2.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
975-1002
0.029
5
7mer
406-423
0.007
1
RP11-182L21.5
hsa-miR-298
0.824
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000606384
Biotype: sense_intronic
Gene id: ENSG00000272489
Gene Name: RP11-182L21.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
712-731
0.018
0
8mer
820-843
0.018
0
MIR7515HG
hsa-miR-298
0.824
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000585718
Biotype: lincRNA
Gene id: ENSG00000236172
Gene Name: MIR7515HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
143-169
0.015
0
8mer
496-510
0.014
0
7mer
719-739
0.008
1
AC012494.1
hsa-miR-298
0.824
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000439259
Biotype: lincRNA
Gene id: ENSG00000229494
Gene Name: AC012494.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
76-91
0.036
0
MIR663AHG
hsa-miR-298
0.824
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000601079
Biotype: lincRNA
Gene id: ENSG00000227195
Gene Name: MIR663AHG
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
- Lung Normal/Primary
- Testes Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
321-342
0.019
0
6mer
15-31
0.017
2
XLOC_008061
hsa-miR-298
0.823
mTTBlnEmP

Gene Details
Chromosome: chrX
Transcript: TCONS_00017462
Biotype: transcript isomorph
Gene id: XLOC_008061
Gene Name: XLOC_008061
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
609-630
0.036
1
ARHGEF38-IT1
hsa-miR-298
0.823
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000512262
Biotype: sense_intronic
Gene id: ENSG00000249885
Gene Name: ARHGEF38-IT1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
316-331
0.036
3
TRPC5OS
hsa-miR-298
0.823
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000612026
Biotype: antisense
Gene id: ENSG00000204025
Gene Name: TRPC5OS
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2272-2297
0.022
1
6mer
356-380
0.009
6
6mer
1110-1128
0.002
2
6mer
1012-1033
0.002
1
TRPC5OS
hsa-miR-298
0.822
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000371970
Biotype: antisense
Gene id: ENSG00000204025
Gene Name: TRPC5OS
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2253-2278
0.022
1
6mer
337-361
0.009
6
6mer
1091-1109
0.002
2
6mer
993-1014
0.002
1
MTHFS
hsa-miR-298
0.822
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000611007
Biotype: lincRNA
Gene id: ENSG00000261229
Gene Name: MTHFS
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
311-333
0.020
Not Conserved
8mer
434-456
0.006
0
7mer
969-982
0.005
1
6mer
2024-2051
0.004
3
LINC01128
hsa-miR-298
0.821
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000624927
Biotype: lincRNA
Gene id: ENSG00000228794
Gene Name: LINC01128
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
353-359
0.025
1
6mer
605-626
0.006
0
6mer
632-654
0.005
0
RP11-4O1.2
hsa-miR-298
0.821
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000568421
Biotype: sense_overlapping
Gene id: ENSG00000259953
Gene Name: RP11-4O1.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-298
Sequence: agcagaagcagggagguucuccca
MirBase ID: MIMAT0004901
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
124-138
0.030
1
7mer
1244-1269
0.003
0
6mer
2300-2317
0.003
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept