LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-214-3p


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Gene
miRNA
Score
DIANA Links
RP3-395M20.8
hsa-miR-214-3p
0.700
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000416860
Biotype: antisense
Gene id: ENSG00000238164
Gene Name: RP3-395M20.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3245-3270
0.008
1
7mer
2503-2525
0.006
1
6mer
2946-2969
0.004
1
7mer
1855-1880
0.003
1
8mer
2406-2425
0.002
Not Conserved
6mer
2500-2512
0.001
1
MKX-AS1
hsa-miR-214-3p
0.700
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000419777
Biotype: antisense
Gene id: ENSG00000230500
Gene Name: MKX-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
403-427
0.006
1
6mer
100-119
0.005
3
6mer
348-374
0.004
0
6mer
219-232
0.003
1
6mer
205-229
0.003
1
6mer
181-207
0.003
0
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