LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-214-3p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-219G17.4
hsa-miR-214-3p
0.729
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000374945
Biotype: lincRNA
Gene id: ENSG00000204277
Gene Name: RP11-219G17.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2123-2142
0.008
1
6mer
2890-2915
0.005
3
8mer
2438-2453
0.005
0
6mer
2887-2900
0.005
2
6mer
523-539
0.002
0
6mer
1409-1426
0.002
1
CTB-73N10.1
hsa-miR-214-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000512571
Biotype: lincRNA
Gene id: ENSG00000248125
Gene Name: CTB-73N10.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1-27
0.023
2
6mer
177-192
0.004
Not Conserved
LINC00928
hsa-miR-214-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000561201
Biotype: lincRNA
Gene id: ENSG00000259218
Gene Name: LINC00928
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
303-329
0.007
3
7mer
238-264
0.006
0
6mer
896-919
0.005
0
6mer
76-102
0.004
3
6mer
307-329
0.003
1
6mer
821-848
0.002
1
RP11-379K22.2
hsa-miR-214-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000558208
Biotype: antisense
Gene id: ENSG00000259175
Gene Name: RP11-379K22.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
527-546
0.027
10
RP11-77H9.2
hsa-miR-214-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000613908
Biotype: antisense
Gene id: ENSG00000260276
Gene Name: RP11-77H9.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
565-582
0.010
1
6mer
565-578
0.008
1
8mer
383-408
0.007
1
6mer
231-252
0.003
1
RP11-4O1.2
hsa-miR-214-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000563434
Biotype: sense_overlapping
Gene id: ENSG00000259953
Gene Name: RP11-4O1.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
302-316
0.015
0
6mer
4071-4092
0.004
1
6mer
1043-1068
0.002
1
6mer
1532-1544
0.002
4
6mer
2131-2151
0.002
1
6mer
2899-2924
0.001
1
6mer
3075-3088
0.001
1
6mer
1529-1544
0.001
4
TAF1A-AS1
hsa-miR-214-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000441835
Biotype: antisense
Gene id: ENSG00000225265
Gene Name: TAF1A-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
165-179
0.018
2
7mer
44-69
0.008
Not Conserved
XLOC_000669
hsa-miR-214-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001368
Biotype: transcript isomorph
Gene id: XLOC_000669
Gene Name: XLOC_000669
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Placenta Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
67-89
0.012
0
8mer
123-146
0.010
0
6mer
226-251
0.004
0
EPB41L4A-AS1
hsa-miR-214-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: NR_015370.2
Biotype: antisense
Gene id: NR_015370.2 (gene)
Gene Name: EPB41L4A-AS1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
926-944
0.016
0
7mer
1079-1099
0.006
0
6mer
783-802
0.005
4
ZBED3-AS1
hsa-miR-214-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000515356
Biotype: antisense
Gene id: ENSG00000250802
Gene Name: ZBED3-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
28-40
0.008
1
6mer
1775-1799
0.008
1
6mer
140-161
0.006
1
7mer
1682-1692
0.005
1
XLOC_008829
hsa-miR-214-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018522
Biotype: transcript isomorph
Gene id: XLOC_008829
Gene Name: XLOC_008829
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
251-263
0.015
0
6mer
248-261
0.011
0
RP11-397A16.3
hsa-miR-214-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000585985
Biotype: lincRNA
Gene id: ENSG00000267172
Gene Name: RP11-397A16.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1765-1791
0.027
1
XLOC_006259
hsa-miR-214-3p
0.727
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00014218
Biotype: transcript isomorph
Gene id: XLOC_006259
Gene Name: XLOC_006259
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
130-152
0.018
1
6mer
111-135
0.005
1
6mer
226-251
0.004
1
PVT1
hsa-miR-214-3p
0.727
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000504719
Biotype: lincRNA
Gene id: ENSG00000249859
Gene Name: PVT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
252-273
0.027
4
RP11-1060J15.7
hsa-miR-214-3p
0.727
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000538640
Biotype: lincRNA
Gene id: ENSG00000256504
Gene Name: RP11-1060J15.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
374-392
0.027
0
RP11-844P9.2
hsa-miR-214-3p
0.727
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000508056
Biotype: lincRNA
Gene id: ENSG00000248596
Gene Name: RP11-844P9.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
692-716
0.021
1
6mer
916-927
0.003
0
7mer
912-927
0.003
0
C14orf64
hsa-miR-214-3p
0.727
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000554822
Biotype: lincRNA
Gene id: ENSG00000246223
Gene Name: C14orf64
UCSC graphic:
Expression:
  Cell Line Tissue Category
hMSC-BM Bone Marrow Stem/Progenitor


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
526-540
0.023
1
6mer
245-264
0.004
3
LINC00607
hsa-miR-214-3p
0.727
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000445174
Biotype: lincRNA
Gene id: ENSG00000235770
Gene Name: LINC00607
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3396-3419
0.019
1
6mer
2876-2899
0.002
Not Conserved
6mer
2855-2881
0.002
2
6mer
2839-2864
0.002
2
6mer
1492-1509
0.002
1
RP11-145P16.3
hsa-miR-214-3p
0.727
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000605703
Biotype: sense_intronic
Gene id: ENSG00000270523
Gene Name: RP11-145P16.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
230-247
0.027
1
CTA-243E7.3
hsa-miR-214-3p
0.727
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624101
Biotype: antisense
Gene id: ENSG00000279548
Gene Name: CTA-243E7.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
974-980
0.024
2
6mer
835-861
0.003
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept