LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-214-3p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
XLOC_008808
hsa-miR-214-3p
0.953
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00017973
Biotype: transcript isomorph
Gene id: XLOC_008808
Gene Name: XLOC_008808
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
- Liver Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
38-61
0.060
0
LL22NC03-22D1.1
hsa-miR-214-3p
0.951
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624601
Biotype: lincRNA
Gene id: ENSG00000279003
Gene Name: LL22NC03-22D1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
16394-16406
0.009
1
8mer
26889-26902
0.007
0
7mer
24761-24766
0.005
0
7mer
23814-23836
0.005
1
6mer
28796-28819
0.005
0
7mer
24249-24260
0.005
1
7mer
1156-1174
0.005
1
7mer
12788-12793
0.003
1
7mer
13852-13869
0.003
Not Conserved
7mer
26606-26630
0.002
1
6mer
26137-26159
0.002
2
6mer
11313-11328
0.001
0
6mer
23127-23153
0.001
0
6mer
26391-26408
0.001
1
6mer
21268-21280
0.001
0
6mer
6693-6714
0.001
1
7mer
10812-10835
0.001
0
6mer
21364-21377
0.001
1
6mer
11509-11534
0.001
0
LINC00960
hsa-miR-214-3p
0.950
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000463183
Biotype: lincRNA
Gene id: ENSG00000242516
Gene Name: LINC00960
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
222-243
0.056
1
6mer
601-621
0.003
0
C1orf132
hsa-miR-214-3p
0.950
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000487977
Biotype: lincRNA
Gene id: ENSG00000203709
Gene Name: C1orf132
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2840-2865
0.018
6
7mer
821-843
0.012
2
6mer
2875-2895
0.008
7
6mer
2872-2885
0.008
8
6mer
2869-2885
0.007
6
6mer
2516-2539
0.003
3
6mer
1029-1044
0.002
3
AC006116.15
hsa-miR-214-3p
0.950
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000593258
Biotype: sense_intronic
Gene id: ENSG00000267429
Gene Name: AC006116.15
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1020-1034
0.032
0
6mer
811-831
0.016
0
6mer
697-713
0.011
0
RP11-114G22.1
hsa-miR-214-3p
0.949
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000590955
Biotype: lincRNA
Gene id: ENSG00000256995
Gene Name: RP11-114G22.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
116-132
0.039
4
7mer
32-58
0.010
0
6mer
209-224
0.009
4
RP11-71H17.7
hsa-miR-214-3p
0.949
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000568966
Biotype: sense_overlapping
Gene id: ENSG00000260391
Gene Name: RP11-71H17.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2415-2435
0.038
7
7mer
2321-2327
0.015
1
6mer
1845-1868
0.005
5
6mer
1100-1124
0.001
1
RP11-728E14.3
hsa-miR-214-3p
0.948
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000577309
Biotype: lincRNA
Gene id: ENSG00000265043
Gene Name: RP11-728E14.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
687-708
0.027
1
8mer
739-762
0.010
0
6mer
815-839
0.009
1
7mer
1399-1422
0.008
1
8mer
1447-1464
0.004
0
DGCR9
hsa-miR-214-3p
0.947
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000609630
Biotype: lincRNA
Gene id: ENSG00000273032
Gene Name: DGCR9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
218-236
0.021
0
7mer
1777-1802
0.012
0
7mer
1663-1681
0.010
0
7mer
2059-2084
0.010
Not Conserved
6mer
546-567
0.003
0
6mer
1798-1818
0.002
0
XLOC_013983
hsa-miR-214-3p
0.947
mTTBlnEmP

Gene Details
Chromosome: chr21
Transcript: TCONS_00029062
Biotype: transcript isomorph
Gene id: XLOC_013983
Gene Name: XLOC_013983
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Colon Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
202-228
0.058
1
XLOC_007253
hsa-miR-214-3p
0.946
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00015543
Biotype: transcript isomorph
Gene id: XLOC_007253
Gene Name: XLOC_007253
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
166-184
0.058
1
AC004540.5
hsa-miR-214-3p
0.944
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000448056
Biotype: lincRNA
Gene id: ENSG00000214870
Gene Name: AC004540.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
146-161
0.051
7
6mer
323-346
0.006
3
XLOC_007206
hsa-miR-214-3p
0.944
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014530
Biotype: transcript isomorph
Gene id: XLOC_007206
Gene Name: XLOC_007206
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
5128-5148
0.019
1
8mer
4951-4964
0.016
3
7mer
4068-4083
0.008
1
7mer
2997-3009
0.003
1
7mer
2052-2077
0.003
2
6mer
3310-3328
0.003
3
6mer
1045-1060
0.002
0
6mer
1731-1754
0.001
0
6mer
3809-3836
0.001
0
6mer
4050-4073
0.001
2
RNF139-AS1
hsa-miR-214-3p
0.944
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: NR_108047.1
Biotype: lincRNA
Gene id: NR_108047.1 (gene)
Gene Name: RNF139-AS1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
5134-5154
0.019
1
8mer
4957-4970
0.016
3
7mer
4074-4089
0.008
1
7mer
3003-3015
0.003
1
7mer
2058-2083
0.003
2
6mer
3316-3334
0.003
3
6mer
1051-1066
0.002
0
6mer
1737-1760
0.001
0
6mer
3815-3842
0.001
0
6mer
4056-4079
0.001
2
RNF139-AS1
hsa-miR-214-3p
0.944
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000499418
Biotype: lincRNA
Gene id: ENSG00000245149
Gene Name: RNF139-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
5142-5162
0.019
1
8mer
4965-4978
0.016
3
7mer
4082-4097
0.008
1
7mer
3011-3023
0.003
1
7mer
2066-2091
0.003
2
6mer
3324-3342
0.003
3
6mer
1059-1074
0.002
0
6mer
3823-3850
0.001
0
6mer
1745-1768
0.001
0
6mer
4064-4087
0.001
2
RP11-260G13.1
hsa-miR-214-3p
0.944
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000549515
Biotype: lincRNA
Gene id: ENSG00000258107
Gene Name: RP11-260G13.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
28-53
0.057
12
XLOC_007795
hsa-miR-214-3p
0.944
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00015570
Biotype: transcript isomorph
Gene id: XLOC_007795
Gene Name: XLOC_007795
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1947-1959
0.034
2
8mer
110-133
0.016
1
6mer
190-203
0.004
0
6mer
310-323
0.002
1
6mer
1227-1246
0.001
0
C1orf132
hsa-miR-214-3p
0.943
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000608023
Biotype: lincRNA
Gene id: ENSG00000203709
Gene Name: C1orf132
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
14965-14983
0.008
0
7mer
12863-12885
0.007
2
6mer
74-91
0.007
4
6mer
100-125
0.005
0
8mer
8650-8673
0.003
0
6mer
6631-6653
0.003
6
6mer
14558-14581
0.003
3
6mer
882-898
0.003
2
8mer
5274-5296
0.003
0
7mer
11472-11489
0.002
1
6mer
9995-10012
0.002
5
6mer
3918-3940
0.002
1
6mer
13071-13086
0.002
3
7mer
3013-3037
0.001
0
6mer
5863-5884
0.001
1
6mer
8792-8818
0.001
1
6mer
4728-4740
0.001
1
6mer
10534-10555
0.001
2
6mer
8011-8037
0.001
1
6mer
11005-11026
0.001
0
6mer
3852-3867
0.001
0
9mer
9981-10000
0.000
0
MIA-RAB4B
hsa-miR-214-3p
0.943
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: NR_037775.1
Biotype: sense
Gene id: NR_037775.1 (gene)
Gene Name: MIA-RAB4B
UCSC graphic: -
Expression:
  Cell Line Tissue Category
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1188-1199
0.023
8
8mer
1295-1315
0.012
2
7mer
596-619
0.008
7
6mer
1194-1202
0.007
8
6mer
989-1002
0.004
7
7mer
1024-1048
0.003
4
LOC286359
hsa-miR-214-3p
0.943
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: NR_026847.1
Biotype: lincRNA
Gene id: NR_026847.1 (gene)
Gene Name: LOC286359
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1950-1962
0.034
2
8mer
113-136
0.016
1
6mer
193-206
0.004
0
6mer
313-326
0.002
1
6mer
1230-1249
0.001
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept