LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-21-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
CTC-459F4.3
hsa-miR-21-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000588318
Biotype: lincRNA
Gene id: ENSG00000267575
Gene Name: CTC-459F4.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
186-211
0.014
0
6mer
110-132
0.013
0
FGF14-IT1
hsa-miR-21-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000437115
Biotype: sense_intronic
Gene id: ENSG00000243319
Gene Name: FGF14-IT1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1453-1479
0.027
0
RP11-164H13.1
hsa-miR-21-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000556386
Biotype: antisense
Gene id: ENSG00000257275
Gene Name: RP11-164H13.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
13-29
0.017
4
6mer
2608-2623
0.005
1
6mer
2186-2199
0.004
1
6mer
871-890
0.002
0
OTUD6B-AS1
hsa-miR-21-5p
0.727
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000522817
Biotype: antisense
Gene id: ENSG00000253738
Gene Name: OTUD6B-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
321-345
0.011
1
6mer
366-391
0.005
1
6mer
576-597
0.004
2
6mer
27-41
0.004
1
6mer
3729-3744
0.003
0
SLC14A2-AS1
hsa-miR-21-5p
0.727
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000592286
Biotype: antisense
Gene id: ENSG00000267097
Gene Name: SLC14A2-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
478-498
0.027
6
RP11-201E8.1
hsa-miR-21-5p
0.726
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000462011
Biotype: lincRNA
Gene id: ENSG00000244464
Gene Name: RP11-201E8.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1987-2003
0.027
1
CASC7
hsa-miR-21-5p
0.726
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000560295
Biotype: lincRNA
Gene id: ENSG00000259758
Gene Name: CASC7
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
311-333
0.008
8
6mer
1122-1141
0.005
8
6mer
580-595
0.004
1
6mer
8633-8645
0.004
4
6mer
2291-2312
0.003
6
6mer
4816-4832
0.002
3
XLOC_007601
hsa-miR-21-5p
0.726
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00015771
Biotype: transcript isomorph
Gene id: XLOC_007601
Gene Name: XLOC_007601
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
508-528
0.027
1
FLJ40288
hsa-miR-21-5p
0.725
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000573229
Biotype: lincRNA
Gene id: ENSG00000183470
Gene Name: FLJ40288
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
29-40
0.015
2
7mer
204-218
0.012
1
ZBED3-AS1
hsa-miR-21-5p
0.725
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000514114
Biotype: antisense
Gene id: ENSG00000250802
Gene Name: ZBED3-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
508-525
0.027
1
RP11-435J9.2
hsa-miR-21-5p
0.725
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000611703
Biotype: lincRNA
Gene id: ENSG00000274340
Gene Name: RP11-435J9.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1510-1532
0.023
2
6mer
1201-1218
0.004
0
RP11-63M22.1
hsa-miR-21-5p
0.725
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000565082
Biotype: lincRNA
Gene id: ENSG00000260558
Gene Name: RP11-63M22.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
418-432
0.016
2
7mer
412-427
0.010
0
RP11-111F5.4
hsa-miR-21-5p
0.724
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000377518
Biotype: retained_intron
Gene id: ENSG00000204802
Gene Name: RP11-111F5.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
281-305
0.021
0
9mer
549-570
0.006
Not Conserved
XLOC_007218
hsa-miR-21-5p
0.724
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014536
Biotype: transcript isomorph
Gene id: XLOC_007218
Gene Name: XLOC_007218
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1594-1616
0.017
1
6mer
508-525
0.005
3
6mer
1026-1048
0.002
Not Conserved
6mer
902-927
0.002
1
LINC00824
hsa-miR-21-5p
0.722
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000520206
Biotype: lincRNA
Gene id: ENSG00000254275
Gene Name: LINC00824
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1595-1617
0.017
1
6mer
509-526
0.005
3
6mer
1027-1049
0.002
Not Conserved
6mer
903-928
0.002
1
RP11-1191J2.2
hsa-miR-21-5p
0.722
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000598370
Biotype: antisense
Gene id: ENSG00000242686
Gene Name: RP11-1191J2.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
70-89
0.026
1
CTD-3187F8.2
hsa-miR-21-5p
0.721
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000597569
Biotype: antisense
Gene id: ENSG00000268595
Gene Name: CTD-3187F8.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
366-380
0.026
0
LINC00383
hsa-miR-21-5p
0.721
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000433664
Biotype: lincRNA
Gene id: ENSG00000237534
Gene Name: LINC00383
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
787-811
0.022
1
6mer
91-103
0.004
0
XLOC_006870
hsa-miR-21-5p
0.721
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014794
Biotype: transcript isomorph
Gene id: XLOC_006870
Gene Name: XLOC_006870
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1731-1751
0.026
0
AC097467.2
hsa-miR-21-5p
0.721
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000508191
Biotype: antisense
Gene id: ENSG00000250910
Gene Name: AC097467.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
355-376
0.023
1
6mer
424-445
0.003
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept