LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-205-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-403A3.3
hsa-miR-205-5p
0.718
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000617298
Biotype: lincRNA
Gene id: ENSG00000275830
Gene Name: RP11-403A3.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
706-729
0.026
1
RP11-105C19.2
hsa-miR-205-5p
0.718
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000567401
Biotype: lincRNA
Gene id: ENSG00000260973
Gene Name: RP11-105C19.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1009-1025
0.015
2
7mer
1367-1380
0.011
1
EPHA1-AS1
hsa-miR-205-5p
0.718
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000429289
Biotype: antisense
Gene id: ENSG00000229153
Gene Name: EPHA1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
55-71
0.020
1
6mer
217-238
0.002
0
6mer
1233-1253
0.002
2
6mer
2102-2127
0.001
1
6mer
789-804
0.001
4
SPG20OS
hsa-miR-205-5p
0.718
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000493739
Biotype: antisense
Gene id: ENSG00000120664
Gene Name: SPG20OS
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
232-257
0.026
1
CYP1B1-AS1
hsa-miR-205-5p
0.718
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000427168
Biotype: antisense
Gene id: ENSG00000232973
Gene Name: CYP1B1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
176-197
0.026
1
RP11-778O17.4
hsa-miR-205-5p
0.717
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000558822
Biotype: antisense
Gene id: ENSG00000259541
Gene Name: RP11-778O17.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2050-2072
0.014
0
8mer
255-276
0.010
Not Conserved
6mer
621-646
0.003
2
SPG20OS
hsa-miR-205-5p
0.717
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000488319
Biotype: antisense
Gene id: ENSG00000120664
Gene Name: SPG20OS
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
146-171
0.026
1
RP11-137H15.4
hsa-miR-205-5p
0.717
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000619737
Biotype: lincRNA
Gene id: ENSG00000276008
Gene Name: RP11-137H15.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
862-884
0.012
2
7mer
840-867
0.012
1
6mer
332-356
0.002
2
LINC00877
hsa-miR-205-5p
0.717
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000468646
Biotype: lincRNA
Gene id: ENSG00000241163
Gene Name: LINC00877
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
318-336
0.016
2
6mer
2160-2172
0.007
7
6mer
1974-1989
0.003
2
LINC01438
hsa-miR-205-5p
0.716
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000512794
Biotype: lincRNA
Gene id: ENSG00000249519
Gene Name: LINC01438
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
258-276
0.023
0
6mer
207-228
0.003
0
DLX6-AS1
hsa-miR-205-5p
0.716
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000430027
Biotype: antisense
Gene id: ENSG00000231764
Gene Name: DLX6-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
8710-8722
0.009
7
7mer
9524-9542
0.004
1
7mer
9658-9680
0.003
0
6mer
4894-4908
0.001
0
6mer
8883-8890
0.001
1
6mer
11559-11578
0.001
1
6mer
7550-7569
0.001
1
6mer
9458-9479
0.001
0
6mer
9298-9317
0.001
0
6mer
12684-12701
0.001
1
6mer
11493-11508
0.001
1
6mer
9442-9465
0.000
0
6mer
9427-9443
0.000
1
RP11-746B8.1
hsa-miR-205-5p
0.716
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000578782
Biotype: antisense
Gene id: ENSG00000263765
Gene Name: RP11-746B8.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
366-393
0.026
1
ZNRD1-AS1
hsa-miR-205-5p
0.716
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000452229
Biotype: antisense
Gene id: ENSG00000204623
Gene Name: ZNRD1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1369-1396
0.007
1
8mer
2881-2892
0.006
Not Conserved
7mer
1807-1827
0.004
2
8mer+wobble
3373-3393
0.004
0
6mer
745-758
0.002
1
6mer
3001-3027
0.002
1
AC009313.1
hsa-miR-205-5p
0.716
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000425470
Biotype: antisense
Gene id: ENSG00000224467
Gene Name: AC009313.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
256-283
0.026
4
RP11-339A11.2
hsa-miR-205-5p
0.716
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000567886
Biotype: lincRNA
Gene id: ENSG00000260322
Gene Name: RP11-339A11.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
453-478
0.026
0
XLOC_005466
hsa-miR-205-5p
0.716
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011192
Biotype: transcript isomorph
Gene id: XLOC_005466
Gene Name: XLOC_005466
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
105-129
0.021
2
6mer
574-599
0.003
1
6mer
2093-2114
0.002
0
RP11-22L13.1
hsa-miR-205-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000607061
Biotype: lincRNA
Gene id: ENSG00000272235
Gene Name: RP11-22L13.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
766-788
0.020
0
6mer
318-341
0.002
1
6mer
2757-2782
0.002
1
6mer
731-744
0.001
0
6mer
1835-1853
0.001
1
LINC00943
hsa-miR-205-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000535544
Biotype: lincRNA
Gene id: ENSG00000189238
Gene Name: LINC00943
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2213-2233
0.021
0
6mer
1225-1252
0.002
2
6mer
457-483
0.002
1
OSER1-AS1
hsa-miR-205-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000439943
Biotype: lincRNA
Gene id: ENSG00000223891
Gene Name: OSER1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
358-379
0.014
2
7mer
387-405
0.006
1
6mer
319-339
0.004
2
6mer
483-505
0.002
1
MIR646HG
hsa-miR-205-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000421257
Biotype: lincRNA
Gene id: ENSG00000228340
Gene Name: MIR646HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
356-379
0.023
3
6mer
436-455
0.003
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept