LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-205-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-10A14.9
hsa-miR-205-5p
0.741
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000623764
Biotype: lincRNA
Gene id: ENSG00000279949
Gene Name: RP11-10A14.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
125-146
0.028
1
MAGI1-IT1
hsa-miR-205-5p
0.741
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000460754
Biotype: sense_intronic
Gene id: ENSG00000272610
Gene Name: MAGI1-IT1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1828-1846
0.020
2
7mer
2047-2062
0.007
1
RP11-386G11.10
hsa-miR-205-5p
0.741
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000548149
Biotype: antisense
Gene id: ENSG00000258017
Gene Name: RP11-386G11.10
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
481-507
0.028
12
RP11-586K2.1
hsa-miR-205-5p
0.740
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000523254
Biotype: antisense
Gene id: ENSG00000253553
Gene Name: RP11-586K2.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
162-180
0.028
4
LINC01515
hsa-miR-205-5p
0.740
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000608678
Biotype: lincRNA
Gene id: ENSG00000228065
Gene Name: LINC01515
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
796-822
0.028
Not Conserved
RP11-692D12.1
hsa-miR-205-5p
0.739
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000502790
Biotype: antisense
Gene id: ENSG00000250220
Gene Name: RP11-692D12.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
212-239
0.028
1
PGM5P3-AS1
hsa-miR-205-5p
0.739
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000614900
Biotype: lincRNA
Gene id: ENSG00000277631
Gene Name: PGM5P3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
427-448
0.016
1
6mer
38-56
0.008
5
6mer
468-485
0.003
2
RGS5
hsa-miR-205-5p
0.739
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000528019
Biotype: antisense
Gene id: ENSG00000232995
Gene Name: RGS5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
472-482
0.020
0
7mer
124-147
0.007
1
SNHG14
hsa-miR-205-5p
0.739
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000549804
Biotype: antisense
Gene id: ENSG00000224078
Gene Name: SNHG14
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2924-2944
0.018
2
8mer
589-605
0.006
0
6mer
700-715
0.002
1
6mer
4951-4973
0.002
1
LINC01515
hsa-miR-205-5p
0.739
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000601979
Biotype: lincRNA
Gene id: ENSG00000228065
Gene Name: LINC01515
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
352-378
0.028
Not Conserved
AC016682.1
hsa-miR-205-5p
0.739
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000437118
Biotype: lincRNA
Gene id: ENSG00000230645
Gene Name: AC016682.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
238-260
0.016
1
7mer
217-239
0.010
1
6mer
54-75
0.001
0
XLOC_013697
hsa-miR-205-5p
0.738
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028348
Biotype: transcript isomorph
Gene id: XLOC_013697
Gene Name: XLOC_013697
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3664-3687
0.020
1
7mer
2248-2264
0.005
1
6mer
2932-2950
0.002
1
6mer
3223-3247
0.001
0
RP11-24M17.4
hsa-miR-205-5p
0.738
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000623240
Biotype: TEC
Gene id: ENSG00000260288
Gene Name: RP11-24M17.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer+wobble
103-126
0.016
1
6mer
1015-1042
0.011
1
XLOC_000269
hsa-miR-205-5p
0.738
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000242
Biotype: transcript isomorph
Gene id: XLOC_000269
Gene Name: XLOC_000269
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1800-1824
0.013
1
7mer
563-579
0.010
1
6mer
1478-1488
0.003
2
6mer
1131-1152
0.002
1
RP13-228J13.1
hsa-miR-205-5p
0.738
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000412436
Biotype: antisense
Gene id: ENSG00000224216
Gene Name: RP13-228J13.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
884-909
0.017
1
6mer
1300-1326
0.005
1
6mer
1231-1252
0.005
1
RP11-501E14.1
hsa-miR-205-5p
0.738
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000506100
Biotype: lincRNA
Gene id: ENSG00000249409
Gene Name: RP11-501E14.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
- Testes Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
130-153
0.028
0
RP1-191L6.2
hsa-miR-205-5p
0.738
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000445278
Biotype: lincRNA
Gene id: ENSG00000223410
Gene Name: RP1-191L6.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
346-368
0.028
5
CTC-297N7.7
hsa-miR-205-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000585303
Biotype: antisense
Gene id: ENSG00000214970
Gene Name: CTC-297N7.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
507-519
0.015
1
7mer
461-476
0.009
0
6mer
322-344
0.004
0
TIPARP-AS1
hsa-miR-205-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000478005
Biotype: antisense
Gene id: ENSG00000243926
Gene Name: TIPARP-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
225-245
0.028
2
C20orf166-AS1
hsa-miR-205-5p
0.737
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000412495
Biotype: antisense
Gene id: ENSG00000174403
Gene Name: C20orf166-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2025-2043
0.022
1
6mer
2066-2080
0.004
1
6mer
1320-1339
0.001
0
6mer
1768-1787
0.001
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept