LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-205-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-320N21.1
hsa-miR-205-5p
0.771
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000501164
Biotype: antisense
Gene id: ENSG00000245080
Gene Name: RP11-320N21.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
647-671
0.015
0
7mer
431-447
0.008
1
6mer
2547-2567
0.005
0
6mer
190-215
0.004
1
RP11-454C18.1
hsa-miR-205-5p
0.771
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000492731
Biotype: lincRNA
Gene id: ENSG00000241151
Gene Name: RP11-454C18.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
250-268
0.031
2
HAGLR
hsa-miR-205-5p
0.771
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000417086
Biotype: antisense
Gene id: ENSG00000224189
Gene Name: HAGLR
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
481-499
0.023
2
6mer
542-563
0.007
5
XLOC_014255
hsa-miR-205-5p
0.771
mTTBlnEmP

Gene Details
Chromosome: chr22
Transcript: TCONS_00029603
Biotype: transcript isomorph
Gene id: XLOC_014255
Gene Name: XLOC_014255
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2883-2909
0.031
1
CYYR1-AS1
hsa-miR-205-5p
0.770
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000357401
Biotype: antisense
Gene id: ENSG00000197934
Gene Name: CYYR1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
521-537
0.013
0
8mer
2145-2165
0.007
Not Conserved
6mer
2704-2717
0.004
1
6mer
684-708
0.003
1
6mer
2064-2076
0.002
1
6mer
1812-1832
0.001
0
RP11-317G6.1
hsa-miR-205-5p
0.770
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000559303
Biotype: antisense
Gene id: ENSG00000259589
Gene Name: RP11-317G6.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
200-217
0.030
10
DLEU1
hsa-miR-205-5p
0.770
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: NR_002605.2
Biotype: sense
Gene id: NR_002605.2 (gene)
Gene Name: DLEU1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1995-2017
0.030
4
RAPGEF4-AS1
hsa-miR-205-5p
0.770
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000435328
Biotype: antisense
Gene id: ENSG00000228016
Gene Name: RAPGEF4-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4369-4393
0.021
3
6mer
572-576
0.004
1
6mer
2606-2626
0.002
0
6mer
3624-3638
0.001
0
6mer
3006-3022
0.001
1
6mer
2877-2898
0.001
2
RAPGEF4-AS1
hsa-miR-205-5p
0.769
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_026995.1
Biotype: antisense
Gene id: NR_026995.1 (gene)
Gene Name: RAPGEF4-AS1
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4366-4390
0.021
3
6mer
569-573
0.004
1
6mer
2603-2623
0.002
0
6mer
3621-3635
0.001
0
6mer
3003-3019
0.001
1
6mer
2874-2895
0.001
2
LINC01515
hsa-miR-205-5p
0.769
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000599409
Biotype: lincRNA
Gene id: ENSG00000228065
Gene Name: LINC01515
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
671-697
0.030
Not Conserved
RP3-403L10.3
hsa-miR-205-5p
0.769
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000446768
Biotype: antisense
Gene id: ENSG00000236324
Gene Name: RP3-403L10.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
175-193
0.026
0
6mer
310-335
0.005
1
RP1-124C6.1
hsa-miR-205-5p
0.769
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000421737
Biotype: lincRNA
Gene id: ENSG00000232316
Gene Name: RP1-124C6.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
HMEpC Mammary Gland Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
448-473
0.030
7
RP11-758M4.4
hsa-miR-205-5p
0.769
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000518128
Biotype: antisense
Gene id: ENSG00000253706
Gene Name: RP11-758M4.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2478-2505
0.025
1
6mer
512-537
0.003
1
6mer
909-921
0.003
0
XLOC_006116
hsa-miR-205-5p
0.769
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013017
Biotype: transcript isomorph
Gene id: XLOC_006116
Gene Name: XLOC_006116
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
568-593
0.030
0
XLOC_013491
hsa-miR-205-5p
0.769
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00027833
Biotype: transcript isomorph
Gene id: XLOC_013491
Gene Name: XLOC_013491
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
604-628
0.029
5
6mer
662-680
0.002
0
DLEU1
hsa-miR-205-5p
0.768
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: NR_109973.1
Biotype: sense
Gene id: NR_109973.1 (gene)
Gene Name: DLEU1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2048-2070
0.030
4
TIPARP-AS1
hsa-miR-205-5p
0.768
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000492937
Biotype: antisense
Gene id: ENSG00000243926
Gene Name: TIPARP-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
227-247
0.028
2
6mer
385-402
0.002
0
LOC648987
hsa-miR-205-5p
0.768
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: NR_104650.1
Biotype: lincRNA
Gene id: NR_104650.1 (gene)
Gene Name: LOC648987
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
139-163
0.027
0
6mer
500-517
0.003
0
RP11-588H23.3
hsa-miR-205-5p
0.768
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000547656
Biotype: antisense
Gene id: ENSG00000258168
Gene Name: RP11-588H23.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
13-39
0.027
0
6mer
267-290
0.004
4
AC097467.2
hsa-miR-205-5p
0.768
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000595229
Biotype: antisense
Gene id: ENSG00000250910
Gene Name: AC097467.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-205-5p
Sequence: uccuucauuccaccggagucug
MirBase ID: MIMAT0000266
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
115-133
0.027
2
6mer
532-544
0.004
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept